Gene Information

Name : BBta_4984 (BBta_4984)
Accession : YP_001240896.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 5218972 - 5220579 bp
Length : 1608 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGATCACAGCCGATTCGCTCCCCGATGATGTCGCGACGCTGAAGGCGCTGGTGCTCGCCGGCCAGGCGGCGCAGCTCGC
GGCGGAAGCCAAGGCGCGCAATCTCGAAGCCGAAGTCCGCGCCCGCACGCTGCTGATCGAGCAGATGAAGTTCACGATCG
CCAAGCTCAAGCACGAACAGCACGGCCAATCCTCCGAGCGCGCCTCAGTGCTCGATCAGCTCGAGCTCGAACTCGCCGAC
CTCGAGGAGGATGCATCGGAGGCCGAAGCAGAGGCGCATCTGGCAGCCGAACGCGCCAAGGCTGCGAAGATAGACGTGCA
GCCATTCGAGCGGCGGCGTCCGGCGCGGCGGCCGCTGCCCGAGGACCTGCCGCGGGAGCGCGTCGTTCATCCCGCGCCGG
CCAATTGTCCATGTTGCGGCGGCGACAGGCTGCGCAAGATCGGCGAGGACGTGACCGAGATGCTGGAGCTCGTGCCGCGG
CATTGGAAGGTGATCCAGCACGTGCGCGAAAAGTTCTCCTGCCGCACCTGCGAGGCGATCAGCCAGCCGCCGGCACCATT
CCATCCGATCTCACGCGGACGTGCCGGACCGCGTCTGCTGGCGCACATCCTGTTCGCCAAATACGGGCTGCATTTGCCGC
TCAACCGGCAGAGCACGACGTATGCGCATGAGGGCATCGCGCTCGATGTCTCCACACTCGCGGACTGGGTCGGCGCGGCG
GCTGCGACCTTGATGCCGCTGGTCGAGGCGATCAAGGCGCATGTCCTCGCTGCCGAGCGCATCCATGCCGACGACACCAC
AGTGCCGGTTCTGGCCAAGGGCAAGACGCGCACCGGGCGCGTGTGGACCTATGTCCGCGACGATCGTCCTTTCGCCGGCC
ACGCGCCGCCGGCCGCCGTGTTCTTCTACTCGCCCGACCGCTCCGGCACCCATCCAGAGGCGCATCTTGCGACCTATGCC
GGCCCCATGCAGGCGGATGCCTATGCCGGCTTCAACCGCCTTTACGAGGCGGCGCGCAAGCCTGGTCCGGTCATCGAGAT
CGGCTGCTGGGCGCATGCACGGCGCAAGTTCTTCGAGATCGCACGGCTGAAGAAGGCGCCGATCGCGATCGACGCGATCG
CCAAGATCGACGCCCTGTTTGCGATCGAGCGCGAGATCAATGGTCTACCGCAGCACGAGCGCGAAGCCGTGCGCAACGCG
CGCAGCCGTCCGCTGGTCGATGAGCTTCACACATTCCTGCACGAGCGCCGCGCCAAACTCTCCGGCAAGAGCGAGACCGC
CAAGGCGATCGACTACAGCCTCAAGCGCTGGGAGGTGTTCACGCGCTTCATCGACGATGGCCGGCTGTGCATGACCAACA
ATGCGGCCGAACGCGAGCTGCGTGCTGTAGCCATCGGCCGCAAGAACTGGACCTTCGCCGGCTCCGACGAGGGCGGCCGC
CGTGCCGCCGCCATCTACACCCTGATTCAGACCGCCAGGCTCAACAACGTCGACCCGCAGGCCTGGCTCGCCGACGTGCT
CGCCAGACTGCCCGATCATGCGGCCAGCAGGATCGCAGACCTGCTGCCCTGGAGCTGGAAGCACAGCGCCATCCCTGCCG
CTGCCTGA

Protein sequence :
MITADSLPDDVATLKALVLAGQAAQLAAEAKARNLEAEVRARTLLIEQMKFTIAKLKHEQHGQSSERASVLDQLELELAD
LEEDASEAEAEAHLAAERAKAAKIDVQPFERRRPARRPLPEDLPRERVVHPAPANCPCCGGDRLRKIGEDVTEMLELVPR
HWKVIQHVREKFSCRTCEAISQPPAPFHPISRGRAGPRLLAHILFAKYGLHLPLNRQSTTYAHEGIALDVSTLADWVGAA
AATLMPLVEAIKAHVLAAERIHADDTTVPVLAKGKTRTGRVWTYVRDDRPFAGHAPPAAVFFYSPDRSGTHPEAHLATYA
GPMQADAYAGFNRLYEAARKPGPVIEIGCWAHARRKFFEIARLKKAPIAIDAIAKIDALFAIEREINGLPQHEREAVRNA
RSRPLVDELHTFLHERRAKLSGKSETAKAIDYSLKRWEVFTRFIDDGRLCMTNNAAERELRAVAIGRKNWTFAGSDEGGR
RAAAIYTLIQTARLNNVDPQAWLADVLARLPDHAASRIADLLPWSWKHSAIPAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-85 49
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-79 48
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-80 48
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-80 48
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-80 48
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-80 48
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-80 48
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-80 48
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-80 48
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 5e-80 48
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-79 47
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-79 47
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-79 47
tnp AEA34686.1 transposase Not tested Not named Protein 4e-80 47
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-78 47
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 4e-79 47
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 4e-79 47
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 7e-69 42
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 8e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_4984 YP_001240896.1 transposase VFG0793 Protein 1e-80 48