Gene Information

Name : BBta_4975 (BBta_4975)
Accession : YP_001240889.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : integrase core subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 5211655 - 5212479 bp
Length : 825 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence :
GTGCAGCGACTTTGCGCGTTGGCAGGCCTGGCGCGGGCGACCTATTACCGGCATCTCAGCAGACGCAGCCGTGCTGAGGC
CGAGTGCGAGTTGCGCGATCAGATCCAGCGCATCTGCCTCAAGCATCCGTTCTACGGCTATCGGCGGGTGACAGCCGCGC
TTCGGCGCCTAGGGATGGTCGTCAATGCCAAGAAAGTCCTGCGTTTCATGCGTCAGGACAATCTTCTCGCGCAGCGCAAG
ACGCCGTTCCTGAAGCCGCCGACCGAGAGGCCGACAGGCGTGATCGTCATTCCCAACCTGATCCGCGGCCTCGCGCCGTC
GGCTCCGGATCAGATCTGGGTGGCGGACATCACCTACGTCCATCTCGCCAAGACCTTCGCCTATCTCGCCGTCATTCTCG
ATGGCTTTTCCCGCAAAGCAGTTGGCTGGGCCTTCGACGACACCCTCGACGCCTCACTCGCGATCGCTGCGCTCGACAAA
GCGCTTCAATCTCGGAACCCCAAGCCCGGCAGCCTGATCCACCACTCAGACCGTGGCGTACAGTACTCCTCGATTGCCTA
TCGGGAGCGGCTGGCCAAGCGCGACATCAAGATCAGCATGAGCAGTCCCGGCAACCCGTTCGACAACGCCAAGGCCGAAA
GCTTCATGAAAACGCTCAAGGCCGAGGAGATCAACGGCAAGAGCTTTGCCGACGTCAACGACGCCCGGCGCCGGATCAAC
AGCTTCATCGCCGAGATCTACAATAAGGAGCGCTTGCATTCGGCCCTCGGCTATCGATCTCCCCTCGAGTTCGAAGCCGC
GTTCAAGCAAAACACGATGCGATGA

Protein sequence :
MQRLCALAGLARATYYRHLSRRSRAEAECELRDQIQRICLKHPFYGYRRVTAALRRLGMVVNAKKVLRFMRQDNLLAQRK
TPFLKPPTERPTGVIVIPNLIRGLAPSAPDQIWVADITYVHLAKTFAYLAVILDGFSRKAVGWAFDDTLDASLAIAALDK
ALQSRNPKPGSLIHHSDRGVQYSSIAYRERLAKRDIKISMSSPGNPFDNAKAESFMKTLKAEEINGKSFADVNDARRRIN
SFIAEIYNKERLHSALGYRSPLEFEAAFKQNTMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-36 43
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-36 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-36 43
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 3e-32 41