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Name : BBta_4932 (BBta_4932) Accession : YP_001240856.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photo-lyase type I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 5173487 - 5174932 bp Length : 1446 bp Strand : + Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; PUBMED: 10871367 DNA sequence : ATGTCTTTTTCCCCCATCGTAGTATGGTTTCGCGAGAGCCTACGCCTGTCGGACCACCCGGCGTTGCATGCAGCGGCCAC GTCCGGCGCGCCCGTCATATGCTGTTACGTTTACGATACTGAGAGTGCTGCGCTTCGCCCCCTCGGCGGCGCGTCGCGCT GGTGGCTGGCGCAATCACTGCGCGCGCTTCAAGACGAGCTCGACGCGCTTGGCGTCAAGCTCGTGATCCGGCGCGGACCT TCGGCGAAGGCGATCAGCGAGCTGGCGCGCGAGGCGAGCACGAGCGCGGTCTATTGGAACGATGTGGCCCAGACCGGACC GCGCGCCGTGGCCGCAGAGGTCGAGGCGGCGCTCGATGCGATCGGCGTCAAGTCGCGTGTCTTTGCCGACGACCTGCTGA TAGATCCGGCCGAACTGCGCGGCAAGGATGGCCGCGGTCCGCGTGTGTTCACGCCATTCTGGAAGCGCGTGCTCGCCCTG GGCGATCCGCCGAAGCCGCTGCCCGTTCCGGTGCGGCTGTCGTCGCCATCGGGCGTTGCGAGCCTCACGGTCGACAAGCT GGCGCTGGAGCCGACCAGCCCCGACTGGGCCGGCGGTCTGCGCACGACCTGGCGCGCCGGCGAGCGCGCCGCGCAGGCGC GGCTGGCAAAGTTCCTCGAGACCACCGTGCGCGGCTACGCCGCCGATCGCGACCGGCCGGACATCGAGGCAACCTCGCGC CTATCGCCGCATCTGCGCTTCGGCGAAATCAGCCCGCGTCAGATCTGGCACGCGGCGCGGTTCGCCGCCGAGCAGCAGCC GGCCTTCGCGCGCGGCATCGACAAGTTCCTGAGCGAGCTCGGCTGGCGCGAGTTCAGCCGCCACCTGCTGTTCAACAATC CTGACCTCGCAACCCGCAATCTGCAGCCCTCCTTCGACGCATTTCCGTGGTCGCAGGATGCTGCGGCGTTGCGGGCGTGG CAGCGCGGGCAAACCGGCTATCCGATCGTGGATGCCGGGATGCGCGAGCTCTGGCACACCGGCAGCATGCACAACAGGGT CCGCATGGTCGCAGCCTCGCTGCTGGTCAAGCATCTCCTGATCGACTGGCGACTCGGCGAACAATGGTTCTGGGACACGC TGGTTGATGCCGATCCCGGCAGCAACCCGGCGAGCTGGCAGTGGGTGGCCGGCTCGGGCGCTGACGCAGCCCCCTATTTT CGCGTCTTCAATCCCGTGCTGCAGGGCGAGAAGTTCGACTCCAGCGGGACCTATGTGCGACGCTGGGTTCCGGAACTGGC GCGGCTTCCGGCCGCCCTGATCCATCAGCCCTGGGCGGCCAAACCGCTCGAGCTCGCCGAGGCCGGCGTCGTGCTCGGCC GCTCCTACCCGGCGCCGGTCGTCGATCACAGGCACGGACGGGAGCGTGCGTTGGCCGCCTATGCGAGCCTGCGCACAAGT GATTAG Protein sequence : MSFSPIVVWFRESLRLSDHPALHAAATSGAPVICCYVYDTESAALRPLGGASRWWLAQSLRALQDELDALGVKLVIRRGP SAKAISELAREASTSAVYWNDVAQTGPRAVAAEVEAALDAIGVKSRVFADDLLIDPAELRGKDGRGPRVFTPFWKRVLAL GDPPKPLPVPVRLSSPSGVASLTVDKLALEPTSPDWAGGLRTTWRAGERAAQARLAKFLETTVRGYAADRDRPDIEATSR LSPHLRFGEISPRQIWHAARFAAEQQPAFARGIDKFLSELGWREFSRHLLFNNPDLATRNLQPSFDAFPWSQDAAALRAW QRGQTGYPIVDAGMRELWHTGSMHNRVRMVAASLLVKHLLIDWRLGEQWFWDTLVDADPGSNPASWQWVAGSGADAAPYF RVFNPVLQGEKFDSSGTYVRRWVPELARLPAALIHQPWAAKPLELAEAGVVLGRSYPAPVVDHRHGRERALAAYASLRTS D |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 3e-73 | 44 |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 5e-74 | 44 |
