|
Name : cbbT (BBta_0447) Accession : YP_001236639.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 446297 - 448312 bp Length : 2016 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGAATCTCGTTGCGGAGCGCAGAGCAGCCTTAGATGAGGCGCAGATGGCGAACGCGATCCGCGCGCTCGCGATGGACGC GGTCGAGGCTGCGAAGTCGGGCCATCCCGGAATGCCCATGGGCATGGCGGATGTGGCTACGGTGCTCTTCAAGCACTTCG TCAAGATCGACCCGACGCAGCCCAATTGGCCTGATCGCGATCGCTTTGTGCTGAGCGCTGGGCATGGATCGATGTTGCTG TACGCGCTTCATCACCTCCTCGGCTTCCACGACATGCCGATGGATCAATTGCGCCGTTTTCGTCAGCTCGGTAGTCGCAC TGCCGGGCATCCGGAATTCGGCCATGCCGCTGGCATCGAAACGACCACCGGTCCGCTCGGTCAGGGAATCGCAACCGCCG TGGGTATGGCTCTCAGCGAACGCATGCTGAATGCGCGTTTCGGCGATGACCTCGTCGATCACCACACCTATGTGATCGCC GGCGACGGCTGCCTGATGGAGGGGATCAGTCACGAGGCGATTGATCTTGCCGGCCATCTCGGCCTTGGCCGGCTCATCGT GCTGTGGGACGACAACCAGATCACGATCGACGGGCCCACAAGTCTGTCGACCTCGCTGGATCAGAAGGCACGGTTCGTTG CTGCGGGCTGGCATGTCGCGGCCGTCGACGGCCACGACGGTGAAGCGGTCGCCAACGCGATTATCGAAGCAAGAGCCGAT CCCCGTCCGTCCTTGATTGCCTGCCGCACCATTATCGGCTTTGGCGCACCCAACAAGCAGGGGACATCGGCCACGCATGG TGCGCCGCTGGGCAAGGAGGAGGTGGCCGCGGCACGCGAGAGCCTCGGCTGGATCTATTCGCCCTTCGAGGTTCCGGAGG CGATCGTCCATGCCTGGCGCGTAGTTGGCGCTCGCGGAACGCGCATCCGAGCCGAATGGCAAGAGCGGCTCGCTCGCAGC CCCCAGCGGGAGGAGTTTGTGGCCCATCTCGCGCCCCCCGATGCCGCGAGGTTGCACGCAGCGTTGGCCGATCATCGCCG ACGCCTGTGCGGCGAGCGGCCGAAGGTTGCCACTCGCAAGGCTTCCGAGCTGGCGTTGGAGGTCGTGAATTCAACCATCC CCAACATGGTAGGCGGCTCAGCCGATCTCACCGGCTCCAACAACACGCGCACCAAGGGCATGCGTCCCGTGACGCGGAGC GATTTCACGGGCAACTACATCCACTACGGGGTGCGCGAGCATGGGATGGCCGCGGCGATGAACGGCATCTCGCTGCATGG AGGATTGCGCCCCTATGGCGGCACGTTCCTCGCCTTTTCGGATTATTGCCGCGGGGCGATCCGCCTTTCTGCTCTCATGG GTCGGCCGGTCATCTACGTGATGACGCACGATAGCATCGGCCTGGGGGAGGACGGTCCGACGCACCAACCGGTCGAGCAC CTCGCATCGCTAAGAGCGATGCCGAACGTCTACGTGTTCCGGCCCGCCGACGCGGTGGAGACGGCGGAAGCCTGGGAGGT CGCGCTTGCCGCAGCCAAGACGCCGTCGGTGCTTTGCCTCTCGCGGCAGGATCTGCCGACGCTGCGCACGGAGCACGGCG ACGAGAACATGACGGCACGCGGCGCCTATCTCCTGCGCGATCCTGGCGAGCATAGGGATCTGACCATCATCGCCACAGGT TCCGAAGTCGCTATTGCGGTCGAGGCCGCCGACGAGTTGTCGGCGGACGGGCTGGCGGTCGCCGTAGTTTCTGCGCCCTG CTGGGAGCTGTTTGCCGCCCAGGAAGCCGGCTATCGCGCTGCTGTTCTGGGCGAGGGACCGCGCGTCGGCGTCGAGGCCG GAGTCGCTCTCGGCTGGGCAGAATGGCTCGGGCCCAATTCCATCTTCATTGGAATGACGGGCTTCGGCGCCTCTGGTCCT GCCGCCGATCTCTACAACCACTTTGGCATCACAGCCGAACGGGTCGCGGCCGAGGGGTGGAGGCTCGCCCGTAAGCCCGG GGAGGAGCACGAATGA Protein sequence : MNLVAERRAALDEAQMANAIRALAMDAVEAAKSGHPGMPMGMADVATVLFKHFVKIDPTQPNWPDRDRFVLSAGHGSMLL YALHHLLGFHDMPMDQLRRFRQLGSRTAGHPEFGHAAGIETTTGPLGQGIATAVGMALSERMLNARFGDDLVDHHTYVIA GDGCLMEGISHEAIDLAGHLGLGRLIVLWDDNQITIDGPTSLSTSLDQKARFVAAGWHVAAVDGHDGEAVANAIIEARAD PRPSLIACRTIIGFGAPNKQGTSATHGAPLGKEEVAAARESLGWIYSPFEVPEAIVHAWRVVGARGTRIRAEWQERLARS PQREEFVAHLAPPDAARLHAALADHRRRLCGERPKVATRKASELALEVVNSTIPNMVGGSADLTGSNNTRTKGMRPVTRS DFTGNYIHYGVREHGMAAAMNGISLHGGLRPYGGTFLAFSDYCRGAIRLSALMGRPVIYVMTHDSIGLGEDGPTHQPVEH LASLRAMPNVYVFRPADAVETAEAWEVALAAAKTPSVLCLSRQDLPTLRTEHGDENMTARGAYLLRDPGEHRDLTIIATG SEVAIAVEAADELSADGLAVAVVSAPCWELFAAQEAGYRAAVLGEGPRVGVEAGVALGWAEWLGPNSIFIGMTGFGASGP AADLYNHFGITAERVAAEGWRLARKPGEEHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-140 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-132 | 48 |
