Gene Information

Name : BBta_0434 (BBta_0434)
Accession : YP_001236626.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Virulence
Product : prophage CP4-57 regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 435603 - 435821 bp
Length : 219 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence : 
ATGCTCGCATCAGACCGTATCGTCCGCCTCAAAACCGTTCTCGCCCGCACCGGCCTGTCCCGGTCCACCATCTACCGCAA
GATCGCCGAGGGCACGTTCCCGCCCCAGATCAAGATCAGCGTCAACGGCGCGGGCTGGCGGGAATCCGACATCGACCGAT
GGGTCGCCAACCCCGTGGCGTGGCGACCGGGAAGCGGGCGCGGCCTCGATGGCGTCTGA

Protein sequence : 
MLASDRIVRLKTVLARTGLSRSTIYRKIAEGTFPPQIKISVNGAGWRESDIDRWVANPVAWRPGSGRGLDGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 3e-06 42
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 42
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 42
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 42
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 9e-08 41
unnamed CAA21398.1 - Not tested HPI Protein 1e-07 41
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 7e-10 41
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_0434 YP_001236626.1 prophage CP4-57 regulatory protein VFG1118 Protein 9e-10 42
BBta_0434 YP_001236626.1 prophage CP4-57 regulatory protein VFG1141 Protein 3e-10 41