Gene Information

Name : BBta_4330 (BBta_4330)
Accession : YP_001240282.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 4536803 - 4538425 bp
Length : 1623 bp
Strand : +
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence :
ATGAGCTCAACGGGCCCCATTCTCACGGTCGACCGCCTCAGCGTTCGTCTCCCCAAGGGCGCCGACCGCAGCCATGCGAT
CACCGAGGTGTCGCTGTCGGTCGCCGAAAACGAGATCGTCTGCATCGTCGGCGAGTCCGGCTCCGGCAAGTCGATGATGG
CCAATGCGATCATGCGCCTGCTGCCGCAGGGCGTCACCACCGACCATGGGCGCATCCTGTTCGTCGGTCGTGATCTTTGC
GCCGCATCGGCCGCCGAGATGCGCAGCATCCGTGGCGCCGAGATCGCGATGGTGTTCCAGGAGCCGATGACGGCGCTGAA
TCCGCTGCGCACGATCGGCGATCAGATCGGCGAAGTGCTCGACATCCACACCGGTCTCGCGAAGGCCGAGATCCGGTCGC
GCGTGCTTTCGCTGCTGAGCGACGTCCACATCCCGGATCCGCCGCGGGCTGCCAAGGCCTATCCGCATGAGCTGTCCGGC
GGCCAGCGGCAGCGCGCAATGATCGCGATGGCGCTCGCGCTCGATCCGAAGCTGCTGATCGCGGACGAACCGACCACAGC
GCTCGATGTCACGACGCAGGCGCAGATCCTCAAGCTCATTCGCGAGCTGCAACAGCGTCGCAACACCGCGGTGCTCTTCA
TCACCCACGATTTCGGCGTCGTCGCCGAAATCGCCGACCGGGTGGTCGTCATGCAGCATGGCGTGGTGGTGGAGCACGGG
ACGGCGCGCGAGGTGCTCCGCAACCCGCGACATGCCTATACGCAGCAGCTGATCGCCGCGGTGCCGCCCGTCGCCGCGCC
GCCGCCGCGCCGACTGTCGGACCAGACGCTTCTCGCGCTGTCGGGCGTGGTCAAGACCTATCGCGCCGGCGGCTTTCTCG
GCCGTGGCGCGCGCGTGACCCATGCGGTCAAGGATGTCTCGTTCACCTTGCCCAAGGGCGCGACGCTCGGCATCGTCGGC
GAGTCCGGCTCGGGCAAATCGACCCTCGCCCGCTGCATCATCCGGCTGATCGATCCCGATGCGGGATCGATCCTGCTCGA
CGGCCACGACTGGGCGCTGATGTCACGCCGCGAGATCCGGCAGCGGACGCAGCAGATGCAGATGGTGTTCCAGGATCCGT
TCGCCTCGCTGAACCCGCGTCGCAAGGCGATCGACTTGGTGGCTCAAGGGCCGATCGTGCATGGCACACCGCGCGACAAG
GCGCTCAGCGAGGCGCGTGAGCTGTTCCAGCTCGTCGGGCTCGATCCGTCTGCGGCGGATCGCCTTCCGCACGAATTCTC
CGGCGGCCAACGCCAGCGCATCGGGCTTGCGCGCGCGCTCGCGCTGAAGCCCGACGTGCTGGTTGCCGACGAGCCGGTGT
CTGCGCTCGACGTCTCCGTGCAGGCGCAGGTCCTGAGGCTTCTCACCAGCTTGCGCGAGCGGCTCGGCCTGTCCATCATC
TTCATCACGCATGATCTGCGGGTCGCGGCGCAGATCTGCGACCTCGTCGCGGTCATGAAGGACGGCGTGGTCGTCGAACA
CGGCCTCACCCATCAGGTGTTCGGCACGCCGCAGCATGCCTATACGCGGGCGCTGCTCGACGCCATACCGGGCGGCGACT
TCGCCCGGACACCGCATCCGTGA

Protein sequence :
MSSTGPILTVDRLSVRLPKGADRSHAITEVSLSVAENEIVCIVGESGSGKSMMANAIMRLLPQGVTTDHGRILFVGRDLC
AASAAEMRSIRGAEIAMVFQEPMTALNPLRTIGDQIGEVLDIHTGLAKAEIRSRVLSLLSDVHIPDPPRAAKAYPHELSG
GQRQRAMIAMALALDPKLLIADEPTTALDVTTQAQILKLIRELQQRRNTAVLFITHDFGVVAEIADRVVVMQHGVVVEHG
TAREVLRNPRHAYTQQLIAAVPPVAAPPPRRLSDQTLLALSGVVKTYRAGGFLGRGARVTHAVKDVSFTLPKGATLGIVG
ESGSGKSTLARCIIRLIDPDAGSILLDGHDWALMSRREIRQRTQQMQMVFQDPFASLNPRRKAIDLVAQGPIVHGTPRDK
ALSEARELFQLVGLDPSAADRLPHEFSGGQRQRIGLARALALKPDVLVADEPVSALDVSVQAQVLRLLTSLRERLGLSII
FITHDLRVAAQICDLVAVMKDGVVVEHGLTHQVFGTPQHAYTRALLDAIPGGDFARTPHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-75 46
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-75 46
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-75 46
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-75 46
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-92 43