Gene Information

Name : BBta_0388 (BBta_0388)
Accession : YP_001236581.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 388422 - 389129 bp
Length : 708 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence :
TTGGCCGGCACAGCGCCGGACACCATTACCATCGCCAACGTCAATCTCTCGCTCGGCACCGGAGCGGCGCGTGTTCACAT
TCTCAAGGACATCAGCCTGCGGGTGGGACAAGGCGAGACGATCGGCCTGATCGGACCGTCGGGCTCCGGCAAGTCCACGC
TGCTGATGGTGATGGCGGGATTGGAACGTCCAGACAGCGGTCAGGTGGTGGTCAATGGCACCGCTTTCAATGCCCTGGAC
GAGGACGCGCTGGCCCGGTTCCGCGGCCGCCAGGTCGGCATCGTCTTCCAGTCCTTCCACCTGATCCCGACCATGACCGC
ACTCGAGAATGTCGCGGTGCCGCTGGAGCTGGCCGGGCATTCCGGCGCCGCCGAGCGGGCCGCGCGCGAGTTGGACTCGG
TCGGCCTCGGCCACCGGCTGCACCATTATCCGACCCAGCTGTCCGGCGGCGAGCAGCAGCGCGTGGCGCTGGCGCGCGCC
CTCGCCCCCGACCCGGCCATCCTGGTGGCCGACGAGCCGACCGGCAATCTCGACGAGACCACCGGCCGGCAGATCGTCGA
CCTGCTGTTCACCAAGCATGCCGAGCGCGGCATGACCCTGGTGCTCGTGACCCATGACAGCGGGCTTGCGCATCGCTGCG
ACCGTGTCGTGCGGCTGCGCTCGGGACGGATCGAAGCCGACGGCGCACACGAGCCTGCCCTGGCATGA

Protein sequence :
MAGTAPDTITIANVNLSLGTGAARVHILKDISLRVGQGETIGLIGPSGSGKSTLLMVMAGLERPDSGQVVVNGTAFNALD
EDALARFRGRQVGIVFQSFHLIPTMTALENVAVPLELAGHSGAAERAARELDSVGLGHRLHHYPTQLSGGEQQRVALARA
LAPDPAILVADEPTGNLDETTGRQIVDLLFTKHAERGMTLVLVTHDSGLAHRCDRVVRLRSGRIEADGAHEPALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_0388 YP_001236581.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-35 45
BBta_0388 YP_001236581.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-40 44