Gene Information

Name : BBta_3436 (BBta_3436)
Accession : YP_001239436.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 3582915 - 3583652 bp
Length : 738 bp
Strand : +
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence : 
ATGGACGCCTATCCTCCCAAACAGAATAGCGAAGGACTGCCGGTGTTTCACGCCCGGGGGCTTTCGAAGACCTATCGAAT
GGGAGAGATCGAGGTGCATGCTCTGCGCGACGTCGATCTCGACATTTTCGAAGGCGAGTTTGTTGTACTTCTTGGGCCGT
CCGGCTCAGGCAAATCGACCCTGCTGAACATTCTGGGCGGTCTGGACAGCCCGACCTCAGGTGAAGCTCACTGGCGCGAC
CATAACCTTGTCGGCGCGACTGATGCGGAATTGACCCGCTACCGGCGCGAGCATGTCGGCTTTGTCTTTCAATTCTACAA
TCTCATCCCCAGCCTCACGGTGCTGGAAAACGTCGCATTGGTGAACGAGATTGCGGACAAGCCGCTGGATCCGCTCGAGG
TGCTCGAACTCGTCGGGCTCGAGAATCGGATCGATCACTTTCCGGCGCAACTGTCCGGCGGCGAGCAGCAGCGCGTCGCG
GTCGCCCGCGCCATCGTCAAGTCGCCGGACGTGCTGCTGTGCGACGAGCCCACGGGGGCGTTGGATTACGAGACCGGCAA
GGTGGTGCTGGCGGCGATCGCGCGAGCCAATGAGCGTCTCGGCACCACGACGATCATCATCACGCACAATGCCGCGATCG
CGGGCATGGCAGACCGTGTGTTGCGGCTCGGCGGCGGGCGGATCGTCAGTGAAGAATGCAATTCGCACCGATTGTCGGCA
AACGAGGTGCACTGGTGA

Protein sequence : 
MDAYPPKQNSEGLPVFHARGLSKTYRMGEIEVHALRDVDLDIFEGEFVVLLGPSGSGKSTLLNILGGLDSPTSGEAHWRD
HNLVGATDAELTRYRREHVGFVFQFYNLIPSLTVLENVALVNEIADKPLDPLEVLELVGLENRIDHFPAQLSGGEQQRVA
VARAIVKSPDVLLCDEPTGALDYETGKVVLAAIARANERLGTTTIIITHNAAIAGMADRVLRLGGGRIVSEECNSHRLSA
NEVHW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-31 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBta_3436 YP_001239436.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-45 53
BBta_3436 YP_001239436.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-29 48
BBta_3436 YP_001239436.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-34 44
BBta_3436 YP_001239436.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-33 42
BBta_3436 YP_001239436.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 41