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Name : gabD (BBta_0032) Accession : YP_001236242.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 34256 - 35752 bp Length : 1497 bp Strand : - Note : Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic DNA sequence : ATGACACCGACCGCAGCCACCCGCACCACGCCGTCCGCGACTGCCAGCTTGCGGGAACGTCTGAAGGACGGCTCGCTGCT GCGTGAGCAGTGCTATATCGACGGCAGCTGGGTCGGCGTTCCCGTCTTCCCGGTCAACAATCCGGCCACCGGCGCCGAAC TCGCCAAGGTGGCTCAGCTTGGCGCCGCGGAGACGACGCAGGCGGTCGAGGCCGCCGCGCGGGCCTTCCCGGCCTGGGCC AAGCTGACCGCCAAGCAGCGCTCCAATCTCCTGCGCAAATGGTTCGAGCTGATCGTGGCGAACCGCGAGGACCTCGCGCT GATCCTCACCTCCGAGCAGGGCAAGCCGCTCAACGAGGCGCTCGGCGAGGTCGATATCGGCGCCGCCTATATCGAGTTCT TCGCCGAGGAGGCGCGCCGCGTCTATGGCGAGACGATCCCGACGCAGAAGCCGGATGCACGGCTGCTCGCGCTCAAGCAG CCGATCGGCGTCTGCGGTGCGATCACGCCGTGGAATTTTCCGAACTCGATGATCACCCGCAAAGTGTCCCCGGCCCTCGC TGCCGGCTGCACCGTGGTGCTGAAGCCGGCCAATGAAACGCCGCTGTCGGCGCTGGCGCTCGCCGTGCTGGCTGAGCGCG CCGGCATTCCGAAGGGCGTGCTCAACATCATCACCGGCGACGCGCCGCCGATCGGCAAGGTGCTGTGCGAGCATCCGGCC GTTCGCTTCGTCGGCTTCACCGGCTCGACCGAGGTCGGCAAGATCCTGTACCGCCAGTCCGCCGGCACGGTGAAGAAGCT CGGCCTCGAGCTCGGCGGTAACGCGCCGTTCGTGGTGTTCGACGATGCCGATGTCGATGCGGCGGTCGAAGGCGCCATCG TCTCGAAGTATCGCAACATGGGCCAGACCTGCGTCTGCGCCAACCGCCTCTATGCACAGGACGGCATCTACGACGCCTTC GTCGAGAAGCTGGCGGCGCGGGTCGCGGCGATGAAGATCGGCGACGGCACCGAGGCCGGCGTTGTGCAGGGACCACTCAT CAACGAGGAGGCGGTGGAGAAGGTCGAGCGCCACATCGCCGATGCGGTGAAGGGCGGCGCGACGATCGTCACCGGCGGCA AGCGCCATGCGCTCGGCCGCACCTTCTTCGAGCCGACGGTTCTATCCAACGTGAAGGCCGATGCGCTGGTCGCGCATGAG GAGACGTTCGGCCCGCTCGCGCCGGTCATCCGCTTCCAGAGCGAGGCCGACGTCATCGCGATGTGCAACGCCTCGCCGTT CGGTCTTGCCTCCTACTTCTACGCCCGCGATCTCGGCCGCGTCTGGCGCGTGGCGGAGGCGCTGGAGTCGGGCATGGTCG GCGTCAACACCGGCCTGATCACCACCGAAGTGGCGCCGTTCGGCGGCGTCAAGGAGAGCGGCCTGGGGCGCGAGGGTTCG CATCACGGCATCGAGGAATATCTCGAGATCAAATATGTGATGATGGCCGGCGTGTGA Protein sequence : MTPTAATRTTPSATASLRERLKDGSLLREQCYIDGSWVGVPVFPVNNPATGAELAKVAQLGAAETTQAVEAAARAFPAWA KLTAKQRSNLLRKWFELIVANREDLALILTSEQGKPLNEALGEVDIGAAYIEFFAEEARRVYGETIPTQKPDARLLALKQ PIGVCGAITPWNFPNSMITRKVSPALAAGCTVVLKPANETPLSALALAVLAERAGIPKGVLNIITGDAPPIGKVLCEHPA VRFVGFTGSTEVGKILYRQSAGTVKKLGLELGGNAPFVVFDDADVDAAVEGAIVSKYRNMGQTCVCANRLYAQDGIYDAF VEKLAARVAAMKIGDGTEAGVVQGPLINEEAVEKVERHIADAVKGGATIVTGGKRHALGRTFFEPTVLSNVKADALVAHE ETFGPLAPVIRFQSEADVIAMCNASPFGLASYFYARDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGS HHGIEEYLEIKYVMMAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 9e-133 | 62 |
