Gene Information

Name : BBta_3117 (BBta_3117)
Accession : YP_001239141.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : MFS family transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2223
EC number : -
Position : 3269324 - 3270661 bp
Length : 1338 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein

DNA sequence :
ATGTCGCATGAGCTCGAAGTCAGGACGATCGCCAAGATCACCGCGCGCCTCGTTCCGTTCCTGGTGATCTGCTATTTCGT
CGCCTATCTCGACCGGGTGAATGTCGGGTTCGCCGCACTCACCATGAACCAGGACCTCGGCCTCTCACAGACGGCGTTCG
GCTTCGGTGCCGGCATCTTCTTCGTTGCCTATTTCATCTTCGAAGTCCCATCCAACCTGTTGCTGGAACGGTTCGGTGCG
CGCCGATGGATCGCGCGGATCATGCTGAGCTGGGGCGTCCTGTCCGGATTGATGGCCTGTCTTCCCTGGATCTCGCGGGT
GACGGGGCTTGGCCATGAAACCACCTTCTACGTTCTGCGCGTCCTGCTCGGTGCCGCAGAAGCCGGCTTCTTCCCGGGCA
TCATCTTCTATCTCACCCTCTGGTTTCCAGCCGAGTATCGCGCCAGGATCGTCGGCTACTTCATGGCCGCGATTCCGCTT
TCGACCGTGATCGGCGCCCCGGTGTCGGGCGTCCTGCTGTATCTGCACGGCGGCTTCGGCCTTGCGGGATGGCAATGGCT
GTTTCTCATCGAGGCGATCCCGGCAGTGATCCTGGCCGTCGTCGTGTTCTTCTATCTGACAGACCGCCCCGAGGACGCCG
GCTGGCTGGCGCGCGATGAGCAGGAATGGCTCAGTCGCCGGCTCCTGGTCGAGCGGCGCCAGCGCGAGGCGGCCCGGACC
TACACGGTCTCCGAGGTCCTGTTCGACCGGCGCGTGATCAGCCTCAGCCTGATTTATTTTGGCGCGGTCGCGACCAATTA
CGGCCTCAGCTTCTTCCTGCCGCAGATCGTCAAGGCATTCGGCCTCAACACCTTCCTGACGACTCTCGTGTCGGCGGCGC
CCTACCTCGTCGGCGTCATCGGCATGGTCTGGTGGGGCCGGCGCTCGGACCGGGCTGCGGAGCGCACCTATCATGCGGCC
ATCCCGTTATTGGTCGCGTCGGGCGGCCTCGTCCTGGCCGTGCTGGTCGCCGATCCGAGCTTGAATATGGTCGCCTTCTG
TATTGCAGGATTCGGCATCTTCGCCTGCCTTCCGGTGTTCTGGACGTTGCCGACCGCCTTCCTGTCGGGTGCAGCGGCGG
CCGCCGGAATCGCCGTCGTCAACTCGATCGGCAACCTCGCTGGCTTCGCCGGCCCGTTCGCGATGGGGTGGCTCAGGGAC
CAGACGGGCAGTTATACCGACGGCCTGTTGCTGCTCGCCGGGCTCGGCATCGTCGCGATGGGGATCGTGCTTGGTATCGG
CCACGACACGGCGCTCGAGCGCGCGCCCTCAGGCGAGCACGCGGCGATGCGGGAGTGA

Protein sequence :
MSHELEVRTIAKITARLVPFLVICYFVAYLDRVNVGFAALTMNQDLGLSQTAFGFGAGIFFVAYFIFEVPSNLLLERFGA
RRWIARIMLSWGVLSGLMACLPWISRVTGLGHETTFYVLRVLLGAAEAGFFPGIIFYLTLWFPAEYRARIVGYFMAAIPL
STVIGAPVSGVLLYLHGGFGLAGWQWLFLIEAIPAVILAVVVFFYLTDRPEDAGWLARDEQEWLSRRLLVERRQREAART
YTVSEVLFDRRVISLSLIYFGAVATNYGLSFFLPQIVKAFGLNTFLTTLVSAAPYLVGVIGMVWWGRRSDRAAERTYHAA
IPLLVASGGLVLAVLVADPSLNMVAFCIAGFGIFACLPVFWTLPTAFLSGAAAAAGIAVVNSIGNLAGFAGPFAMGWLRD
QTGSYTDGLLLLAGLGIVAMGIVLGIGHDTALERAPSGEHAAMRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 5e-56 46
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 5e-56 46
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 5e-56 46
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 4e-56 46
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 1e-59 46