Gene Information

Name : BBta_2940 (BBta_2940)
Accession : YP_001238973.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate isomerase HpcD-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3232
EC number : 5.3.3.10
Position : 3059300 - 3059698 bp
Length : 399 bp
Strand : -
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence :
ATGCCGCATTTCAGCATCGAATACTCGGCCAATCTCGACGAGCGCCTCGACATGGCCGAAGTCTGTGAAATCGTTCGCAA
GGCCGCCGGCGAAACCGGCATCTTTCCGATTGGCGGCATCCGCGTGCGCGCCATCCGCTGTGAGCATTACGCGATCGCCG
ACGGCAAGCCCGACTATGGCTTCCTCGCGATGCTGCTGCGGCTCGGCGAAGGCCGCGATCTCGCAGCTCGGCAGCGCGCC
GGGGAACACGTCTTCAAAGCGCTCTCAGCGCATCTCGACCCGATCTTCGCGAGCAGCAAGTTCGCGCTGTCCTTCGACAT
GCAGATCAACGACGCAGCGACCAGCTGGAAACGCAACAACATCCACGACGCCCTGAAAGCGGAGGCATCACATGGATAA

Protein sequence :
MPHFSIEYSANLDERLDMAEVCEIVRKAAGETGIFPIGGIRVRAIRCEHYAIADGKPDYGFLAMLLRLGEGRDLAARQRA
GEHVFKALSAHLDPIFASSKFALSFDMQINDAATSWKRNNIHDALKAEASHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 1e-19 41