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Name : BBta_2611 (BBta_2611) Accession : YP_001238664.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2708136 - 2709689 bp Length : 1554 bp Strand : + Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic DNA sequence : GTGACCGATCCTGCATCTCCAGGATTTGTCGACGAGATTGCGCGGCAGCTGGGATTGCCGCGCATCGCGCTGGCCGAGCT GTTGGCTGCGAAGCCGCTGGCGGAGCAGTTTTCACGGCGCTTTCTGCGCGAGACGATGGTCTTCCCGTTCCAATCCGCCG ATCACAGGCCGTGTCTTGCCGTCGCGGATCCTCGCGACACTGCGACAGCGCGCGCGGCTGAACTGGTCTTCGGCGGCCCG ATCGAGCTGGTGGTCGCCTCCGCCGAGGACATCGCGACAGCGCTCAATCGGCTGGCCGGCGATGATGAGGTCCCGGCTCG CACTGAGGCGGCGCAGCCGCAGCTGCGCGAAGACGACATCGAGAGCCTGCGCGACCTGGCCACCGGAGCTCCGGTGGTGC GGGCCGTCAACGACCTGTTCGAACAGGCGGTCGAGCTGCGCGCCAGCGATATCCATGTCGAGGCGATGCGCAGCGGTCTG TCGGTCCGGATGCGTGTCGACGGCTTGCTGAAGCCGGTTCCTGCGCCGTCGGGTGTGCTGCCCCAGGCGGTGATCTCGCG CATCAAGATTGTCGCCGGGCTGAACATCGCCGAACGGCGGCTGCCTCAGGACGGTGCCGCGCGGCTGCGCATCGGCCGTC TCGAGCTCGATGTGCGCGTCGCCGTGATGCCGACGCAGCATGGCGAGTCCGCCGTGATCCGGCTGCTGCCGAAGGAACGT GGGCTGCTGTCGGTCGAAAAGCTCGGCTTCGCCTCGCACGACGATCAAGCGCTCCGCCGCCTGCTGGCGCTGCCGCACGG CATGATCGTGATCTGCGGCCCGACGGGCAGCGGCAAGACCACGACGCTTGCGACCGCGTTGTCGATGCTCAACGAGCCGA CGCGGAAGATCCTCACCATCGAGGATCCTGTTGAATACGAGATCCCGGGCATCAACCAGTCGCAGGTCAAGCCGGCCATC GGGTTGACCTTTGCCTCCGCGCTGCGGTCGTTCGTGCGGCAGGACCCGGACGTCATCATGGTCGGCGAGGTGCGCGACGG CGAGACCGCCCACGTGGCCGTTCATGCCGCGTTGACCGGCCATCTGGTGCTGACGACGCTGCATACCGAGAATGCCGCGG CGGCCGTGCCGCGGCTGCTCGATCTCGGCGTCGAGGATTTCCTGCTGCGCTCGACGCTGCGGGCCGTCATCGCGCAGCGG CTGGTCCGCAGACTCTGCGTGCGCTGCCGTGCGAAGCGGAGGCTGAGCGCCGAGAATCTCTGTGCGGATCCACGCTATGC CGCCCTCGGCTTCGAGGTCGGCGAGACCGTGTATGAGCCCGCAGGATGCGACAGCTGCGGCGGCTCCGGTTATCGCGGCC GGCTCGGCATCTTCGAAGTGCTCGAGCTCAACCCGGAGATCCGATCGCTGATCCAGGGGACGACCGATGCCGGCGTGATC GACCGTGCCGCCGTTCGTCAGGGCATGACGACGATGCTCGATGACGGGATCGCAAAGTGCCGGGCCGGCGTGACGTCGGT CGCGGAGATCTTGCGCGTGACAACGTTACGGTGA Protein sequence : MTDPASPGFVDEIARQLGLPRIALAELLAAKPLAEQFSRRFLRETMVFPFQSADHRPCLAVADPRDTATARAAELVFGGP IELVVASAEDIATALNRLAGDDEVPARTEAAQPQLREDDIESLRDLATGAPVVRAVNDLFEQAVELRASDIHVEAMRSGL SVRMRVDGLLKPVPAPSGVLPQAVISRIKIVAGLNIAERRLPQDGAARLRIGRLELDVRVAVMPTQHGESAVIRLLPKER GLLSVEKLGFASHDDQALRRLLALPHGMIVICGPTGSGKTTTLATALSMLNEPTRKILTIEDPVEYEIPGINQSQVKPAI GLTFASALRSFVRQDPDVIMVGEVRDGETAHVAVHAALTGHLVLTTLHTENAAAAVPRLLDLGVEDFLLRSTLRAVIAQR LVRRLCVRCRAKRRLSAENLCADPRYAALGFEVGETVYEPAGCDSCGGSGYRGRLGIFEVLELNPEIRSLIQGTTDAGVI DRAAVRQGMTTMLDDGIAKCRAGVTSVAEILRVTTLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-66 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-66 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BBta_2611 | YP_001238664.1 | general secretion pathway protein E | VFG2426 | Protein | 9e-63 | 48 |
| BBta_2611 | YP_001238664.1 | general secretion pathway protein E | VFG2048 | Protein | 8e-67 | 45 |
| BBta_2611 | YP_001238664.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-66 | 45 |
| BBta_2611 | YP_001238664.1 | general secretion pathway protein E | VFG1876 | Protein | 3e-67 | 44 |
| BBta_2611 | YP_001238664.1 | general secretion pathway protein E | VFG1880 | Protein | 5e-62 | 42 |
| BBta_2611 | YP_001238664.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-57 | 41 |
