|
Name : rph (BBta_0186) Accession : YP_001236389.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 191975 - 192688 bp Length : 714 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGGCCGAGCCGCCGTGCACCGGATGAATTGCGGCCCGTGAGCCTGGAACGGGGCGTCGTCAAATACGCCGAGGGCTC CTGCCTGGTGAAGTTCGGCGACACCCATGTGCTGGTCACCGCCACGCTGGAGGACCGGCTGCCGCCATGGCTGAAGGGCC AGGGCCGCGGCTGGATCACGGCCGAATACGGCATGCTGCCGCGCGCCACCCTGGAACGGACCCGGCGGGAGGCCTCCGCA GGCAAGCAGACCGGCCGCACGGTCGAGATCCAGCGTCTGATCGGCCGCTCGCTGCGCACGGCGATCGACCTGGAGGCGCT CGGCGAGCGCCAAATCACGGTCGATTGCGACGTGCTGCAGGCCGATGGCGGCACCCGCACGGCGTCGATCACCGGGGCCT GGGTCGCGCTCGCCGACTGCATCAAATGGATGAAGACCCGCAATATGCTGAAGACCGAGGTCTTGCGCGCCAATGTCGCC GCGATCTCCTGCGGCATCTACAACGGCACGCCAGTGCTCGACCTCGACTACGCCGAGGATTCCGAGGCCGAGACCGACGC CAATTTCGTCATGACCGGCGATGGCCGCATCATCGAGGTGCAGGGCACGGCGGAAAAGACCCCATTCACCGAGGCCGAGT TCCTGGCGCTGATGGCGCTGGCGCGCAAGGGCGTGGCCCGGCTGGTCGATCTACAGAAGATGGCGGTCGCGTGA Protein sequence : MRPSRRAPDELRPVSLERGVVKYAEGSCLVKFGDTHVLVTATLEDRLPPWLKGQGRGWITAEYGMLPRATLERTRREASA GKQTGRTVEIQRLIGRSLRTAIDLEALGERQITVDCDVLQADGGTRTASITGAWVALADCIKWMKTRNMLKTEVLRANVA AISCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRIIEVQGTAEKTPFTEAEFLALMALARKGVARLVDLQKMAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 4e-49 | 50 |
