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Name : glcA (BBta_1668) Accession : YP_001237784.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Unknown Product : LctP family glycolate permease Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 1742009 - 1743673 bp Length : 1665 bp Strand : + Note : Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 5 : Inner membrane protein; PUBMED: 11785976 DNA sequence : ATGTGGAATCAAATCTACGACCCGTTGGGGAGCCCGGCGCTGTCGACGCTGGCGGCGGCCGTGCCGGTGGTGACGCTGCT GGTGCTGATCGCCAGCGGCAAGGTGAAGGCGCATATCGCGGCGATCATCGCCGTGATCCTGACCAACCTGATCACGATCT TCGTCTTCACGATGCCGGCCAACATGTCGCTGCGCGCGACGTTCCTCGGCGTCGTGACCGGCTTCTTCCCGATCGGCTGG ATCGTGCTGAACGTCATCTTCCTCTACCAGGTCACGGTCTCGACCGGCCGCTTCGAGCTCTTGAAGCGGGCGATCGGCGG CGTCACCGAGGACCGCCGTCTGCAACTCCTGCTAGTCGCCTTCTCGTTCGGCGCGTTCTTTGAGGGCGCGTCGGGCTTCG GCACCCCGGTGGCGATCACCGGCGCCGTGCTGATCGGACTCGGCTTCTCGCCGCTGGCGGCCTCCGGCCTGTCGCTGATC GCCAACACGGCGCCGGTGGCCTATGGCGCGCTGGGCACGCCGATCCAGGGCCTCGCCTCGGTGACCGGTCTCGACCCCTA CATTCTCGGCGCCATGGTCGGCCGTCAGCTGCCGGTGTTCTCGCTGATCGTGCCGTTCTGGGTGATCTGGGCGTTCGCGG GCTGGAAGGGCATGAAGGACGTCTGGCCGGCGATTCTCGTCACCGCCATCTCCTTCGCTGTGCCGCAGTTCCTGATTTCG AACTACGTCAATCCGTGGATCGTCGACATCGGCGCTTCGCTGATCTCGATGGGCGCGCTGATCCTGTTCCTGAAGGTCTG GCAGCCGCGCCAGCTCTGGCTGTCGCCGGCGCTGCGTGGCCGTGACGAATCGGCCGCCACGATGGCGGCGCAGAAGCCGC TCGACCGCACGCCGCTGACGCAAGCCGAACTGTGGGGCGCGCTGCTGCCCTGGATCATCGTCTGCGTGATCATGCTGATC TGGGGCAATGGCGCCTTCAAGAGCTGGGCGAATTCGATCTTCACCTGGAGTTATCCGGTCCCGGAGCTCGATAAGCTGAT CAACAAGATGCCGCCGGTGGCGGCGAAGCCGACGCCTGAAGGCGCCGTCTTCTCGTTCACCTATCTGACCTTCACCGGCA CCGGCATGCTGATCGCTGCGATCATCTCCGGCTTCCTGATGGGGGTCGGGCCGGGCAGACTGATCGCCGAATATGGCCGC ACCATCCGGCTCTGCGCGATCTCGCTGATCACGATCTCGGCCATGCTGGCGATCGGCACGCTGACCCGGCTGTCCGGTGT GGACGCGACGCTCGGCCTCGCTTTTGCGGCGACCGGCGTGCTCTACCCGTTCTTCGGCACCCTGCTCGGCTGGTTGGGCG TGGCGCTGACGGGATCGGACACCGCCTCCAACGTGCTGTTCGGCAATCTGCAGAAGATCACCTCGGAGCAACTCGGCCTG TCGCCGGTGCTGATGGCGGCCGCCAACTCGTCCGGCGGCGTCATGGGCAAGATGATCGATGCGCAATCGATCGTGGTCGC CTCGACCGCCACCAATTGGTACGGCCATGAGAGCTCGATCCTGCGCTACGTCTTCCTGCACTCGATCGTGCTGGCCTGCT TGGTCGGCCTGTTCGTGACCTTGCAAGCCTATGTCTATCCGTTCACCGCGATGGTGCTGAAGTAG Protein sequence : MWNQIYDPLGSPALSTLAAAVPVVTLLVLIASGKVKAHIAAIIAVILTNLITIFVFTMPANMSLRATFLGVVTGFFPIGW IVLNVIFLYQVTVSTGRFELLKRAIGGVTEDRRLQLLLVAFSFGAFFEGASGFGTPVAITGAVLIGLGFSPLAASGLSLI ANTAPVAYGALGTPIQGLASVTGLDPYILGAMVGRQLPVFSLIVPFWVIWAFAGWKGMKDVWPAILVTAISFAVPQFLIS NYVNPWIVDIGASLISMGALILFLKVWQPRQLWLSPALRGRDESAATMAAQKPLDRTPLTQAELWGALLPWIIVCVIMLI WGNGAFKSWANSIFTWSYPVPELDKLINKMPPVAAKPTPEGAVFSFTYLTFTGTGMLIAAIISGFLMGVGPGRLIAEYGR TIRLCAISLITISAMLAIGTLTRLSGVDATLGLAFAATGVLYPFFGTLLGWLGVALTGSDTASNVLFGNLQKITSEQLGL SPVLMAAANSSGGVMGKMIDAQSIVVASTATNWYGHESSILRYVFLHSIVLACLVGLFVTLQAYVYPFTAMVLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 7e-92 | 47 |
