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Name : gspE (BBta_1278) Accession : YP_001237424.1 Strain : Bradyrhizobium sp. BTAi1 Genome accession: NC_009485 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1360138 - 1361787 bp Length : 1650 bp Strand : + Note : Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic DNA sequence : ATGAGCGGTACGCTGTCGACCCAGTTTCAGGCCTATCTTCGTCAGCGGCATCCGCAGCGCTCGGGCGAGCCTGCCGGCGA CACGCAGCTCGCGCTCTGGGATCGGTTCGGCCTGTCGGCCGAGGCCTTTGCCGAGGAGGCCGTGCAGTTCACCGGGCTGG ATCGCGCATCCCTGCGCGAGCTGATGGCGGCGACGCCCGCGGTCAGCGAATTCTCGGACCGCTTCCTGCGCGAAGTGCTC GGCTATCCCTACCGGAGCTCCGAGGGCAGCGCCAATTTTGCCATGGCCGATCCGACCGATCAGGCGGTGCGGCGGGCCGC CGAACTGGTGCTCGGCCCTGACATTATATTTAAGGTCGCGTCGCACGAGGACATTGCGGTCGTGCTCGACCAGCGGCTGG CCGCTGGAGAGGAAGCCGACATCTCGCCGGTCCAGGACCTGCGCGACGACGACATCGAAAGCCTGCGGGATCTGGCGAGC GGCGCGCCGGTGGTGCGGGCGGTCAACGATCTCATCGAGAAGGCCGTGGAAATGCGCGCCAGCGACATCCACATCGAGCC GTTCTCGACCGGGCTCGTCGTCCGGCTCCGCGTCGACGGGCTGTTGCGTCCGATCGCAGCGCCGGCGGGCGTGCTGCCGC AGGCCGTGATCTCCCGCATCAAGATCGTCGCGGGCCTGAACATTGCGGAGCGGCGACTGCCGCAGGACGGCGCCGCGCGC ATTCGCGCCGGCCGCGCGGAGATCGACGTCCGCGTCGCGATCATGCCGACGCAGCATGGTGAGACCGCCGTGCTCCGCAT CCTGCCCAAGGATCGCTCGCAGCTCGTCGCGAGCCGTCTCGGCCTGTCCCAGCGCGATGACGCCGCGCTCCGCCGCCTGA TCGCGCTACCGCACGGCATGATCGTGATCACCGGACCGACCGGCAGCGGCAAGACAACGACGCTGGCGACCATCCTGTCG ATGCTCAACACTCCGGAACGCAAGATCCTCACGATCGAGGACCCGGTGGAATATGAGATTCCCGGCATCAACCAGTCGCA GATCAAGCCGGCGATCGGGCTGACATTCGCCACCGCTCTGCGCTCCTTCGTCCGGCAAGACCCCGACGTCATCATGGTCG GCGAGATCCGAGACAACGAGACCGCGCATGTCGCGGTTCACGCCGCGCTGACCGGCCATCTCGTGCTGACGACATTACAT ACCGAGACCGCGGCGGCGGCGGTGCCGCGGCTGCTCGATCTCGGCGTCGAGGGCTATCTGCTGCGATCGACATTGCGCGC CGTCATCGCGCAGCGGCTGGTGCGCCAGCTTTGCGATCATTGCAAGATCGCCAAGCCGCTCGACGAGGAGACCTGTCGGA ACGATCCGCGCTTCGGCCATTTGGGCCTCGCGGCCGGGGACGTGACATGGCATCCCGTCGGCTGCGAGCGATGCGGCCAG AGCGGTTACCGCGGACGCGTCGGTGTGTTCGAGATGCTCGAACTGACGAGCAGCCTGCGCGAGCTGATCGCGGACAGCGC CGATGGCCTGGCGATCGATCGGCTGGCGATGCGGGAGGGCATGACGACGATGCTCGACGACGGCGTCGCCAAGTGCCGCG CCGGCGTCACTTCGACCTCCGAGCTGTTTCGTGTCCTCGTCGCGCGCTGA Protein sequence : MSGTLSTQFQAYLRQRHPQRSGEPAGDTQLALWDRFGLSAEAFAEEAVQFTGLDRASLRELMAATPAVSEFSDRFLREVL GYPYRSSEGSANFAMADPTDQAVRRAAELVLGPDIIFKVASHEDIAVVLDQRLAAGEEADISPVQDLRDDDIESLRDLAS GAPVVRAVNDLIEKAVEMRASDIHIEPFSTGLVVRLRVDGLLRPIAAPAGVLPQAVISRIKIVAGLNIAERRLPQDGAAR IRAGRAEIDVRVAIMPTQHGETAVLRILPKDRSQLVASRLGLSQRDDAALRRLIALPHGMIVITGPTGSGKTTTLATILS MLNTPERKILTIEDPVEYEIPGINQSQIKPAIGLTFATALRSFVRQDPDVIMVGEIRDNETAHVAVHAALTGHLVLTTLH TETAAAAVPRLLDLGVEGYLLRSTLRAVIAQRLVRQLCDHCKIAKPLDEETCRNDPRFGHLGLAAGDVTWHPVGCERCGQ SGYRGRVGVFEMLELTSSLRELIADSADGLAIDRLAMREGMTTMLDDGVAKCRAGVTSTSELFRVLVAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-66 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-67 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_001237424.1 | general secretion pathway protein E | VFG2426 | Protein | 9e-58 | 48 |
| gspE | YP_001237424.1 | general secretion pathway protein E | VFG2048 | Protein | 7e-68 | 47 |
| gspE | YP_001237424.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-64 | 46 |
| gspE | YP_001237424.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-67 | 45 |
| gspE | YP_001237424.1 | general secretion pathway protein E | VFG1880 | Protein | 2e-65 | 45 |
