Gene Information

Name : BBta_1235 (BBta_1235)
Accession : YP_001237381.1
Strain : Bradyrhizobium sp. BTAi1
Genome accession: NC_009485
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1310304 - 1310582 bp
Length : 279 bp
Strand : +
Note : Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic

DNA sequence :
ATGCCGAAGAAGAGGTTCAATGCGGAGCAGATCGTGGTGCTGCTGCGCCAGATTGAAGTGTTGATGTCGCAGGGCAAGGC
CGCGCCGGTGGCCTGCCGGGAAGCCGGAATTTCGCAGCAGAGTTATTATCGCTGGCGAAAGGAATACGGTGGTCTTGAGC
TCGATCAGGCGAAGCGGATGAAGGATCTGGAGCGGGAGAATATCCGCCTCAAGCGTCTCGTTGCCGATCTGTCGCTGGAG
AAGCAGGTGCTCAAGGACGTTGCCTCGGGAAACTTATAA

Protein sequence :
MPKKRFNAEQIVVLLRQIEVLMSQGKAAPVACREAGISQQSYYRWRKEYGGLELDQAKRMKDLERENIRLKRLVADLSLE
KQVLKDVASGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-16 48
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 4e-14 47
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-14 47
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-14 47
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-15 46
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 2e-15 46
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-14 45