Gene Information

Name : Acry_0965 (Acry_0965)
Accession : YP_001234102.1
Strain : Acidiphilium cryptum JF-5
Genome accession: NC_009484
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1066951 - 1068771 bp
Length : 1821 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACGTCCAGACCAAGCCTGCCAGTGTCACGACCGGCCCGATCGCCGGCTCGCGCAAGGTGTTTACCTCGCCCGAGGG
GCGGCCCGACATCGCCGTGCCGTTCCGCGAGGTCGACCTGCACCCCAGCGCGGGGGAAGCGCCGTTCCGGCTCTATGACA
CGTCGGGGCCGTTCACCGACCCGCATTTCAGTCTCGATCTCGACAACGGGCTGCCGCTGGTGCGCGGCGCCTGGATCGAG
CGGCGCGGATTCGATGCCGTGGCCGGCCGGGCGGTGAAGCCGGAGGATAACGGATTCGCGGCGGCGGACCGGCTGGTGCC
CCCCTGCCCCGCCGGGCGGAGCGTGTTCGCCGGCAAGGATGGTGCGCTGGTGACGCAGTATGAATACGCGCGGGCCGGGA
TCGTCACGGAAGAGATGATCTATGTCGCGCATCGCGAAAATCTCGGCCGGGCGAAGGCCGCCGAAGGCGCGGCGGCGCGG
CGGGCGGATGGCGAGCGGTTCGGCGCGGCGATCCCCGAATTCGTGACGCCGGAATTCGTCCGCAGCGAAATCGCGGCGGG
ACGGGCGATCATTCCGGCGAACATCAACCACCCCGAGCTGGAGCCGGTGATCATCGGGCGCAATTTCCTCGTCAAGATCA
ACGCCAATATCGGCAACTCGGCGGTCACCTCGGGGGCCGCGGAAGAGGTCGAGAAGCTGGTCTGGGCGATTCGCTGGGGC
GCGGATACGGTGATGGACCTCTCCACCGGGCGGAACATCCACAACATCCGCTCCTGGATCATGCGCAACTCGCCGGTGCC
GATCGGCACCGTGCCGATCTACCAGGCGCTTGAGAAGGTCGGCGGTGATCCGGACAAGCTCGACTGGGAGGTGTTCCGCG
ACACGCTGATCGAGCAGGCCGAGCAGGGCGTGGACTATTTCACCATCCATGCCGGGGTGCGGCTCGCCCATGTGCCGCTG
ACGGCGAAGCGGGTGACCGGCATCGTCTCGCGCGGCGGGTCGATCATGGCGCGCTGGTGCCTCGCGCATCACCGCGAGAG
CTTCCTCTACGAGAAGTTCGACGAGATCTGCGACATCATGCGCAAGTATGACGTGTCGTTCTCGCTGGGCGACGGGCTGC
GGCCCGGCTCGATCGCCGATGCCAATGACGCGGCGCAGTTCGCCGAGCTGGAGACGCTGGGCGAGCTGACGAAGATCGCC
TGGGCCAAGGGCTGCCAGGTGATGATCGAGGGCCCCGGCCATGTGCCGATGCACAAGATCAAGGAGAACATGGAAAAGCA
GCTCGAGGTCTGCCACGAGGCGCCGTTCTATACGCTCGGGCCGCTGACCACCGACATCGCGCCGGGCTACGATCACATCA
CCTCGGCGATCGGGGCGGCGATGATCGGCTGGTTCGGCACCGCGATGCTCTGCTACGTCACGCCGAAGGAGCATCTCGGC
CTGCCCAACCGCGACGATGTGAAGACCGGCGTCATCACCTACCGTCTTGCGGCGCACGCGGCGGATCTCGCCAAGGGGCA
TCCGGCGGCGAAGCTGCGCGACGACGCGGTGAGCCGGGCGCGCTTCGAGTTCCGCTGGGAGGACCAGTTCAATCTCGGCC
TCGACCCGGACACGGCGCGCGCCTTCCACGACGAGACGATGCCCAAGGAGGCGCACAAGGTCGCGCATTTCTGCTCGATG
TGCGGGCCGAAATTCTGCTCGATGAAGATCACCCAGGACATTCGCGACGAGGTGGCGCGCGAGGAAGGGCTCGCGCAGAA
GGCGGCGGAGTTCCGCGATGGCGGCAGCCGCATCTATGTCGAGGATCAGGCGGCGGAGTGA

Protein sequence :
MNVQTKPASVTTGPIAGSRKVFTSPEGRPDIAVPFREVDLHPSAGEAPFRLYDTSGPFTDPHFSLDLDNGLPLVRGAWIE
RRGFDAVAGRAVKPEDNGFAAADRLVPPCPAGRSVFAGKDGALVTQYEYARAGIVTEEMIYVAHRENLGRAKAAEGAAAR
RADGERFGAAIPEFVTPEFVRSEIAAGRAIIPANINHPELEPVIIGRNFLVKINANIGNSAVTSGAAEEVEKLVWAIRWG
ADTVMDLSTGRNIHNIRSWIMRNSPVPIGTVPIYQALEKVGGDPDKLDWEVFRDTLIEQAEQGVDYFTIHAGVRLAHVPL
TAKRVTGIVSRGGSIMARWCLAHHRESFLYEKFDEICDIMRKYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIA
WAKGCQVMIEGPGHVPMHKIKENMEKQLEVCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLG
LPNRDDVKTGVITYRLAAHAADLAKGHPAAKLRDDAVSRARFEFRWEDQFNLGLDPDTARAFHDETMPKEAHKVAHFCSM
CGPKFCSMKITQDIRDEVAREEGLAQKAAEFRDGGSRIYVEDQAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 64
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 64
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 6e-178 62