Gene Information

Name : Acry_0311 (Acry_0311)
Accession : YP_001233457.1
Strain : Acidiphilium cryptum JF-5
Genome accession: NC_009484
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 362240 - 362974 bp
Length : 735 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGATCCTCGGCTTCGTGCATGACCGGACCGATGCGATGACGCAACCCTGCCTGGCCATCCTGCTGGTCGAGGACGACGA
GCTGACCGCCAATCTCGTGCGCGCCGCGCTCGGCGCCGAGGGGCATCTCGTCGCCGTCGCCGCCGATGGCCGGGACGGCC
TGCTGCGCGCCGCCGCCGGCCATGAGGGCCGGGCCTGGGACCTGCTGATCGTCGACCGCATGCTGCCCGGCCTCGACGGT
CTCGCCCTGGTCCGCACCCTGCGCGGCGCCGGCCTGAGCATGCCGGCGCTGTTCCTCACCGCCCTCAGCGGCATCGACGA
CCGGGTCGAGGGCCTGCGCGCCGGCGGCGACGACTATCTCGTCAAGCCCTTCGCCGCCGCCGAACTGGCCGCCCGCGTCG
CCGCCCTGGCCCGGCGCGGCGAGATGCGCCCCTCCGGGCCGGTGCTCCGGGTCGAGGATCTCGAACTCGACCGGCTCACC
CGCGCCGTCACCCGCGCCGGCCGGCGCATCGACCTCAAGCCCCGCGAATACGAGGTGCTGGAATACCTGATGCGCCATGC
CGGGCGCGTGGTGACGCGGACGATGCTGCTCGAGGATGTCTGGAACTTCCATTTCGACCCGCGCACCAGCGTGGTGGAGT
CGCATGTCTCCCGCCTGCGCGCCAAGCTCGGCGCCGGGCGCGAGCTGCTGCACACCGTGCGCGGCGCCGGCTACCGCATC
GGCGACCCCGCATGA

Protein sequence : 
MILGFVHDRTDAMTQPCLAILLVEDDELTANLVRAALGAEGHLVAVAADGRDGLLRAAAGHEGRAWDLLIVDRMLPGLDG
LALVRTLRGAGLSMPALFLTALSGIDDRVEGLRAGGDDYLVKPFAAAELAARVAALARRGEMRPSGPVLRVEDLELDRLT
RAVTRAGRRIDLKPREYEVLEYLMRHAGRVVTRTMLLEDVWNFHFDPRTSVVESHVSRLRAKLGAGRELLHTVRGAGYRI
GDPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-30 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acry_0311 YP_001233457.1 two component transcriptional regulator BAC0083 Protein 7e-34 44
Acry_0311 YP_001233457.1 two component transcriptional regulator BAC0347 Protein 5e-31 43
Acry_0311 YP_001233457.1 two component transcriptional regulator BAC0111 Protein 1e-34 43
Acry_0311 YP_001233457.1 two component transcriptional regulator BAC0638 Protein 3e-28 43
Acry_0311 YP_001233457.1 two component transcriptional regulator BAC0125 Protein 1e-32 43
Acry_0311 YP_001233457.1 two component transcriptional regulator BAC0308 Protein 1e-31 43
Acry_0311 YP_001233457.1 two component transcriptional regulator BAC0197 Protein 2e-28 43
Acry_0311 YP_001233457.1 two component transcriptional regulator AE000516.2.gene3505. Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acry_0311 YP_001233457.1 two component transcriptional regulator VFG1389 Protein 4e-23 44
Acry_0311 YP_001233457.1 two component transcriptional regulator VFG1390 Protein 2e-29 43
Acry_0311 YP_001233457.1 two component transcriptional regulator VFG0596 Protein 1e-30 42