Gene Information

Name : Acry_2958 (Acry_2958)
Accession : YP_001236067.1
Strain : Acidiphilium cryptum JF-5
Genome accession: NC_009484
Putative virulence/resistance : Virulence
Product : two component sigma54 specific Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3235932 - 3237350 bp
Length : 1419 bp
Strand : +
Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase

DNA sequence : 
ATGAGTGAGCCCACCGTCCCCGAGCCGAGCCTGCTGATCGTCGAGGACGATCCGGGCCTGCGCCGGCAATATCGCTGGGC
GTTCCCCGGCCGCACCGTCCTCGTCGCGGGCGACCGCGACCAGGCCATCGACCAGGCGCGCCGGGCGCGGCCCGAGGTGG
CCATCATCGATCTCGGACTGCCGCCCGACCCCGACGGCATCAGCGAGGGGCTGGCCATTCTCGATGCGCTGTTCCGCGAG
CTTCCGGCGATCAAGGTGATCGTGGCGACCGGCAACGGCCGCCGCGAGAACGCGCTGCTGGCGATCGGGCGCGGCGCCCA
CGACTTCTTCGAAAAGCCGGTCGATATCGAGATCCTGCGGATCATCGTCGACCGCGCCTTCCGGCTGGCCGCGCTGGAGC
GGGAGAACCGCCGCCTCAGCAACATGGTGGGGCCGAGCCCGCTGCCGCGCGTCATCGCCGGCTCCGAGACCATGCTCAAG
ACCTGCCGGACGATCGAGAAGCTCGCGCCGGCGACCGCGCCGGTCCTGCTGCTGGGCGAAAGCGGCACCGGCAAGGAGAT
CCTCGCCCGGGCGCTGCACGATCTCGGCCCCCGCGCGGACGGCCCCTTCATCGCGATCAATTGCGGCGCGATCCCCGAGC
CCCTGCTGGAGTCCGAGCTGTTCGGGCACGAGAAGGGCGCCTTCACCGGCGCCATCAAGCAGACGCCGGGCCGGATCGAA
CTGGCCCAGGGCGGCACGCTCTTCCTCGATGAAATCGGCGACCTGCCGCTCGCCCTGCAGGTCAAGCTGCTGCGCTTCCT
GCAGGAGGGCGTGATCGAGCGGGTGGGCGGGCGGCGCCCGATCCCGATCGACGCGCGGATCGTGTCCGCGACCCATCAGG
ATCTCGACGGGCTGGTCGCCGCCGGCCGGTTCCGGCTCGATCTGCTGTTCCGCCTGAATATCGTCAGCGTCAGGATCCCG
CCGCTGCGCGAGCGCGGCGGCGACGCGGTCCTGCTGGCGCGCTTCTTTCTCCGGCGCTTCGCCCAGGACCAGAACCGTCA
GGGACTCGCCTTCTCCGAAGCGGCGATCGCCGCGCTGATGCGGCATGGCTGGCCGGGCAACGTGCGCGAGCTGGAAAACC
GGGTGCGCCGCGCCGTCATCATGGCCGAAGGCCAGCAGATCGAGGCGGCCGACCTCGACCTGGCGGACGGCGCGCTCGCG
CCGCTGCCGGACCTGCGCTCGGCGCGCCGCGAGGCGGAGCGTGAAGCCGTCCAGCTCGCGCTGGCCCGGGCCGACGGCTC
GATGGTCGCCGCGGCGAAGCTGCTCGGCATCAGCCGTCCCACCCTGTACGCGCTGATCGACAGCCTGGGCCTGAGCGATG
ACGTCAGGGCGGACCGCGCCGCCGACGCCGCCGACCCGTCCGGACCCGACGAGCCATGA

Protein sequence : 
MSEPTVPEPSLLIVEDDPGLRRQYRWAFPGRTVLVAGDRDQAIDQARRARPEVAIIDLGLPPDPDGISEGLAILDALFRE
LPAIKVIVATGNGRRENALLAIGRGAHDFFEKPVDIEILRIIVDRAFRLAALERENRRLSNMVGPSPLPRVIAGSETMLK
TCRTIEKLAPATAPVLLLGESGTGKEILARALHDLGPRADGPFIAINCGAIPEPLLESELFGHEKGAFTGAIKQTPGRIE
LAQGGTLFLDEIGDLPLALQVKLLRFLQEGVIERVGGRRPIPIDARIVSATHQDLDGLVAAGRFRLDLLFRLNIVSVRIP
PLRERGGDAVLLARFFLRRFAQDQNRQGLAFSEAAIAALMRHGWPGNVRELENRVRRAVIMAEGQQIEAADLDLADGALA
PLPDLRSARREAEREAVQLALARADGSMVAAAKLLGISRPTLYALIDSLGLSDDVRADRAADAADPSGPDEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 7e-52 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 7e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acry_2958 YP_001236067.1 two component sigma54 specific Fis family transcriptional regulator BAC0089 Protein 1e-52 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acry_2958 YP_001236067.1 two component sigma54 specific Fis family transcriptional regulator VFG1214 Protein 3e-54 45