Gene Information

Name : Acry_1756 (Acry_1756)
Accession : YP_001234878.1
Strain : Acidiphilium cryptum JF-5
Genome accession: NC_009484
Putative virulence/resistance : Resistance
Product : DEAD/DEAH box helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1938191 - 1940362 bp
Length : 2172 bp
Strand : +
Note : PFAM: helicase domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like

DNA sequence :
ATGGGTCGCGCGGTAGAGCAGCCGGCGGCGGCGCTGGATGAGCGCCTCGGACGATACTTCGGTCATGATGGCTTGCGATA
TAGTCGAGTGCTCCGCCACTGTCAGCCCGTGACCACCAACATCTCCGAGTCGCTGGCGCCGTTCCGGGCCGAGCTTGCCA
GCCTGCCGGGCATCGGCCCGAAACTCGCGGCGCTGATCGCGCGCGCGGTGGGCGGGCCGAGCGTGGGCGACCTGCTGTTC
CACCTGCCGCTGCATTTCATCGACCGCTCGCGGCAGTCGACGCTGGCGGAGGCGGAACCGGGATCGGTCGCGACGGTGAT
GGTCGAGGTGGTGCGGCACGAGGCGCCGGCGCGGCGCGGGCAGCCGCACCGGGTGGTGATTCGCGACGCCAGCGGCTTCG
GCGAGGTGGTGCTGTTCCACCCCGGGCGGCTCGGCCAGTTTCCGGTGGGCGCGAAACTGCTGCTGTCGGGCAAGATCGAG
CGCTTCGCCGACCGCCCTACCCTGCCCCACCCCGATTACGTGCTGCCGGCGGCGCAGGCGGCGAGCCTGCCGGCGATCGA
GCCGGTGCGGGGGCTGACGGCGGGACTCACGGCACGGGTGATGGCGCGGGCGGTGGACGGCGCCCTCGCCCGGCTGCCGG
AGCTGCCGGAATGGCAGTTGCCCTCGGTGCTGCAAAAGCGGCGCTGGCCGGGCTTTACCGCCGCGCTGCGGACGCTGCAC
GCGCCCGAATCGATGCCGGACGACCGCCCGGCACGGCGGCTCGCCTATGACGAATTGCTGGCGCGGCAGCTGGCCTTCGC
GCTGATCCGCGCGCGGCGGCGGCGGCGGCCGGGGCGCGCCTTTGCCGGCGATGGAAGGCTGCGGGCCGCCGCGCTGGCGC
GGTTCGGCTTCGCGCCGACCGATGCGCAGGCGGCGGCACTGGCCGAAATTGACGCCGATCTCGCCGCGCCGCACCGGATG
CTGCGGCTGTTGCAGGGCGATGTCGGCGCGGGGAAGACGCTGGTGGCGACGCTGGCGATGCTGCGCGTGGTCGAGGCCGG
CGCACAGGCCGCCCTGCTCGCCCCCACCGAATTGCTCGCCCGCCAGCATCTGGCGACGCTCGAAAAACTCTGCCCGGTGC
CGGTGGCGCTGCTGACCGGCTCGCTGCGGGCGGCCGAGCGGCGGCTTGTGCTGGCCGGCCTCGCGGATGGGGCGATCCCG
ATCGTGGTCGGCACCCATGCGATCTTCCAGAAGAGTGTCGCGTTCCACGATCTCGGCCTCGCGGTGATCGACGAGCAGCA
CCGGTTCGGCGTCGAGCAGCGTTTCGCCCTCGGCGCCAAGGGAAGTGCGACGGACATGCTGGTGATGACGGCGACGCCGA
TTCCGCGCACGCTGTTGCTCTCGCACTGGGGAGAGATGAGTGTGAGCCGGATTCTGGCGAAGCCCGCCGGACGCAAGCCA
ATCCGCACCACGCTGCACCCGGCGGGGCGGATGGAGGAGATCGTCGCCGCGGTGGCGCGGATGATCCGCCGGGGCGGGCG
GGTGTATTGGGTGTGTCCGCTGGTGGCCGAGAGCGAGGCGGTGGACATCGCGGCCGCCGAGGCGCGGTTCGCCGCACTCG
CAGAGCGGTTCGGCGAGCGGGTGGTGCTGGCGCACGGGCGGCAGCCGATCGAGATCCGGGCGGCGGCGCTGGAGCGCTTC
GCCCGCGGCGAGGCGGACATCCTGGTCTCGACCACGGTGATCGAGGTGGGGGTGGACGTGCCGGAGGCGAACGTGATGGT
GATCGAGCGGGCGGACCGGTTCGGGCTGGCGCAGCTGCACCAGCTGCGCGGGCGGGTCGGGCGCGGGGCGGCGGCGAGTT
TCTGCCTGCTGCTGCACGGCGACGAGCTGAGCCAGGCGGCGCGGCGCCGGCTCGCGATCCTGCGGGAGACGGAGGACGGG
TTCCGCATCGCCGACGAGGATTTCCGGCTGCGCGGCGGCGGTGACATATTGGGGGCGAAACAGTCCGGCCTGCCCGGCTA
CCGGCTGGCGGACGCCGAGCGCGACGAGGACCTGATTCCGATGGCGCAGAAGGACGCGACCCTGCTGCTCGACACCGACC
CGCACCTGGAAAGCCCGCGCGGCCGGGCGGCGCGGGTGCTGCTGCACCTGTTCGAGCAGGACCGCGCGATCCGCGCGCTG
GTGGCGGGATGA

Protein sequence :
MGRAVEQPAAALDERLGRYFGHDGLRYSRVLRHCQPVTTNISESLAPFRAELASLPGIGPKLAALIARAVGGPSVGDLLF
HLPLHFIDRSRQSTLAEAEPGSVATVMVEVVRHEAPARRGQPHRVVIRDASGFGEVVLFHPGRLGQFPVGAKLLLSGKIE
RFADRPTLPHPDYVLPAAQAASLPAIEPVRGLTAGLTARVMARAVDGALARLPELPEWQLPSVLQKRRWPGFTAALRTLH
APESMPDDRPARRLAYDELLARQLAFALIRARRRRRPGRAFAGDGRLRAAALARFGFAPTDAQAAALAEIDADLAAPHRM
LRLLQGDVGAGKTLVATLAMLRVVEAGAQAALLAPTELLARQHLATLEKLCPVPVALLTGSLRAAERRLVLAGLADGAIP
IVVGTHAIFQKSVAFHDLGLAVIDEQHRFGVEQRFALGAKGSATDMLVMTATPIPRTLLLSHWGEMSVSRILAKPAGRKP
IRTTLHPAGRMEEIVAAVARMIRRGGRVYWVCPLVAESEAVDIAAAEARFAALAERFGERVVLAHGRQPIEIRAAALERF
ARGEADILVSTTVIEVGVDVPEANVMVIERADRFGLAQLHQLRGRVGRGAAASFCLLLHGDELSQAARRRLAILRETEDG
FRIADEDFRLRGGGDILGAKQSGLPGYRLADAERDEDLIPMAQKDATLLLDTDPHLESPRGRAARVLLHLFEQDRAIRAL
VAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-126 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acry_1756 YP_001234878.1 DEAD/DEAH box helicase BAC0356 Protein 1e-79 43