Gene Information

Name : Acry_1444 (Acry_1444)
Accession : YP_001234572.1
Strain : Acidiphilium cryptum JF-5
Genome accession: NC_009484
Putative virulence/resistance : Resistance
Product : major facilitator transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1605082 - 1606323 bp
Length : 1242 bp
Strand : -
Note : PFAM: major facilitator superfamily MFS_1

DNA sequence :
ATGAGCGGTTCCACGTCCCGCAGGCGCGGGGCCGCTTTCGGCTTCATCATGGCCACGATCCTGCTGGACATGCTGGCCAT
GGCGATCGTGCTGCCGGTCCTGCCCGCGCTCATCACCGGGCTGGTCGGCGGGGGCGCCGGGCTGAGCGCGCATGTGTTCG
GCGCCTTCGGTGCCGCCTGGGCGGCGATGCAGTTCATTGCCTCGCCGATGCTTGGCGCGCTGTCCGACCGGTTCGGCCGG
CGGCCGGTGATCCTGCTCTCCTGCCTCGGCCAGGCGGTGGATTTCACCGTGATGGCGCTGGCTCCATCGGTCGGCTGGCT
GCTCGCCGGGCGGATTCTCTCCGGCGCTTCCTCGGCCAACATCGCCGCCGCGAATGCATATATTTCCGATGTCACGCCGC
CCGAGCGGCGGGCGGCGGCGTTCGGCGTCTCGGGCGTTGCCGCGGCGATCGGCTTTGTGCTCGGACCGGCGTTGGGCGGT
CTGCTCGGCGCGGTTTCGCTGCGCCTGCCGTTCTGGTTCGCCGCAGGTCTTTCCCTCGCCAACTTCCTCTACGGTCTGGT
GGCGCTGCCGGAATCGCTCGCGCCGCGCCGCCGCCGGCGGATCGGCTGGCGGGGCCTCAACCCGCTGGATGCGCTGCGCT
TCTATCGCCGGCCGGGCGTGGCCGCGCCCGCGACGATCTATGCGCTCGGCACGCTCGCGCTGCAGGCGGTGCCTTCGGTC
ATGGTGCTTTACGTGCAGGAGCGGTTCGGCTGGCGCCCACAGCTGATCGGCGCCACCCTCGCCGCCGCCGGGGTCGGGTT
TGCCGTGGTCGGCGGCGTTGTGGTCGGGCCGATGGTGCGCCGGCTTGGCGAGCCGAGAACGCTTATCCTTGGCCTGATCG
GCGGCGCCGCGGGGTTTGTGCTGTTCGGTCTCGCGCCCGATTCGCGGATTTTCTGGATCGGCGTACCGGTTCTCTCGGCC
TGGGGGCTGGCGATGCCTGCGGTGCAGGGGATCATGGCGCACCGGATTGGCGGGCGCGAGCAGGGGCGGCTGCAGGGGTT
GCTCGCCAGCCTGAACGGGCTGACCGCGCTGGTCGGCCCGTTGCTGTTCACCACGATCTACGCGGCGACGCTGGGGCCTG
ACGGCACGGCGGACGTGCCGCGCTCGGGCACCGCCCTCGTCGTCGCCGGCCTGCTGCTGCTCGCCTCGCTGATTCCGCTG
CGCTGGGCGGTGCGGTATCAGGCCGGCAGGCCGAACCCGTAG

Protein sequence :
MSGSTSRRRGAAFGFIMATILLDMLAMAIVLPVLPALITGLVGGGAGLSAHVFGAFGAAWAAMQFIASPMLGALSDRFGR
RPVILLSCLGQAVDFTVMALAPSVGWLLAGRILSGASSANIAAANAYISDVTPPERRAAAFGVSGVAAAIGFVLGPALGG
LLGAVSLRLPFWFAAGLSLANFLYGLVALPESLAPRRRRRIGWRGLNPLDALRFYRRPGVAAPATIYALGTLALQAVPSV
MVLYVQERFGWRPQLIGATLAAAGVGFAVVGGVVVGPMVRRLGEPRTLILGLIGGAAGFVLFGLAPDSRIFWIGVPVLSA
WGLAMPAVQGIMAHRIGGREQGRLQGLLASLNGLTALVGPLLFTTIYAATLGPDGTADVPRSGTALVVAGLLLLASLIPL
RWAVRYQAGRPNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 1e-18 42
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 1e-18 42
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 1e-18 42
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 2e-18 42
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 1e-18 42
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 1e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acry_1444 YP_001234572.1 major facilitator transporter AY264780.2.gene3.p01 Protein 2e-23 44
Acry_1444 YP_001234572.1 major facilitator transporter NC_011586.7045189.p0 Protein 4e-16 42
Acry_1444 YP_001234572.1 major facilitator transporter NC_010410.6002597.p0 Protein 7e-19 42
Acry_1444 YP_001234572.1 major facilitator transporter CP001485.1.gene2821. Protein 7e-19 42
Acry_1444 YP_001234572.1 major facilitator transporter AF534183.gene.p01 Protein 7e-19 42
Acry_1444 YP_001234572.1 major facilitator transporter X75761.gene.p01 Protein 3e-18 41