Gene Information

Name : Gura_4409 (Gura_4409)
Accession : YP_001233125.1
Strain : Geobacter uraniireducens Rf4
Genome accession: NC_009483
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 5112275 - 5113717 bp
Length : 1443 bp
Strand : +
Note : PFAM: pyruvate kinase

DNA sequence :
ATGAATAGACCATTGCGCAAAACAAAGATTATCGCCACTCTCGGGCCGGCCAGCGGATCGCCGGAAATGGTCGGGCGACT
CATGGATAGCGGGGTGGACGTTTTTCGCCTCAATTTTTCCCACGGCTCCCACGAAGAAAAAACCCGCCTTATCGAAACGA
TCCGCGCCCTGTCTGAACAGAAGGAAAAGACCATCGGCATTCTCGCAGATCTGCAAGGGCCGAAAATCAGGACCGGTCGG
ATGACGGAGGGAGCGATCCCGCTCGTTAGGGGTGAACTGCTCGACATAACCACTGACGACATTCTCGGCCGCCCCGGCCT
GATATCCACCATCTACCAGGCATTGCCCAAGGACGTGAAACAGGGATCGAGGATTCTGCTCGATGACGGCATGATCGAGT
TGAAGGTCCTTTCAGTCTCCGGCAACACGGTTCACTGCACGGTTGTCGAAGGTGGCGTGCTGAAGGATCTTAAAGGGATG
AATCTTCCCGGTGTCGACGTTTCCGCCCCTTCCCTGTCGGAAAAGGATAAGGCAGACCTGGATTTTTGCCTCGGGATGGG
GGTGGATTATATCGCCCTTTCCTTTGTGCGCAGAGCTTCTGACGTGGAAAGCCTTAAGGAGATCATCTACAAGCGGGGGG
AGAACATCCCGGTAATTGCCAAGATTGAAAAGCCTGAAGCGCTGCGCAATTTTAAAAGTATTCTTGCAGCCGCCGATGCT
GTAATGGTGGCAAGAGGGGATCTGGGAGTCGAATTGAGCGCCGAGCGGGTTCCACTTGTGCAGAAAAAAATCATCCGGGC
ATGCAATGAAGCCGGCAAACCGGTCATCACCGCCACGCAGATGCTGGAATCGATGATTCTCCACGCCAGGCCGACCAGGG
CGGAAACTTCCGACGTTGCCAACGCCATTCTCGATGGTACGGACGCCGTCATGCTTTCCGGAGAAACCGCTTCCGGCGGT
TATCCGGTTGAAGCGGTGCGGACCATGGCCAAGATTGCGTTGGACATTGAGCGTTCGGAACTATGGCGACTACCGCCGAT
CAGATCACTGCACAGCAACAATATCCCCGAGGCTGTGGCGGAAGCCGCATGTCACGCGGCGTCCACCCTCAAGGCAAAAG
CCCTGGTGGTATTCACCCAATCGGGCGGCACGGCTGCCCTGATCTCCAAGTTCCGGCCACAACTACCCATCATCGCTTTT
ACTCCATTTCCAGACATTCAGCGCCGTCTTTCTCTCTTTTGGGGGGTAAACAGCTGTCCGATCGGCTCCATGGGGGGAAC
GAACCAGCAGATCAAAGTTGGAGAAATGGCGCTCCTTGCCGCCGGCTTCAAAAAAGGGGATGTGATCGTCATCACCATGG
GGGTGCCGATCGAAGCCAAGGGATCTACCAACCTGATGAAGATCCATATACTGGGAACGGAAGGATTTTATCCGCTTTTC
TGA

Protein sequence :
MNRPLRKTKIIATLGPASGSPEMVGRLMDSGVDVFRLNFSHGSHEEKTRLIETIRALSEQKEKTIGILADLQGPKIRTGR
MTEGAIPLVRGELLDITTDDILGRPGLISTIYQALPKDVKQGSRILLDDGMIELKVLSVSGNTVHCTVVEGGVLKDLKGM
NLPGVDVSAPSLSEKDKADLDFCLGMGVDYIALSFVRRASDVESLKEIIYKRGENIPVIAKIEKPEALRNFKSILAAADA
VMVARGDLGVELSAERVPLVQKKIIRACNEAGKPVITATQMLESMILHARPTRAETSDVANAILDGTDAVMLSGETASGG
YPVEAVRTMAKIALDIERSELWRLPPIRSLHSNNIPEAVAEAACHAASTLKAKALVVFTQSGGTAALISKFRPQLPIIAF
TPFPDIQRRLSLFWGVNSCPIGSMGGTNQQIKVGEMALLAAGFKKGDVIVITMGVPIEAKGSTNLMKIHILGTEGFYPLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 9e-79 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 9e-79 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-79 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-78 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gura_4409 YP_001233125.1 pyruvate kinase VFG0479 Protein 4e-79 44