Gene Information

Name : fliP (Gura_4199)
Accession : YP_001232915.1
Strain : Geobacter uraniireducens Rf4
Genome accession: NC_009483
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 4861410 - 4862165 bp
Length : 756 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
GTGAAATATGGGACCCTCTTTAAAACAGCCTTGATCCTGTTGTGCATGCTGACCGCAGCCTCGGCTTTTGCCGAGCCACT
GGCGCTTCCAACAGTCAGCGTCGGCATGGGCAAAGTGTCCAAGCCTGCCGATGTGGCGGTGGTTCTCCAGATATTCTTCC
TGATGACGGTTCTGTCGCTCGCTCCCGGGCTCTTGATGATGACCACGTCGTTCACGCGCATCGTCGTGGTCCTGTCATTT
TTAAGAAATGCCATTGGTACGCAGCAGGCGCCTTCGAATCAGATCATCATCGGTCTGTCGCTGTTTTTGACCTTTTTCAT
CATGGCTCCCGTATGGCAACAGATCAACACCCAGGCTCTACAGCCCTATAAGGCGCAGACCATCAGCCAGGAAGAAGCTT
TCAAAAGAGCTGTTGCGCCGGTCAGGAAATTCATGCTTTCGCAGGTAAGGGAAAAAGACCTTGCCCTGTTCTTAAGCCTT
TCGAAACTCCCCCGTCCGAAAAACGCCGATGACATTCCTACCCTGACCCTCATTCCGGCATACATGGTCAGTGAGCTGAA
GACCGCCTTCCAGATCGGTTTCCTGGTTTTCATCCCCTTTCTGGTGCTGGACATGGTTGTGGCATCGGTCCTCATGTCCA
TGGGGATGATGATGCTGCCGCCGGTCATGATATCACTCCCCTTTAAGATTCTCCTGTTTGTCCTGGTGGATGGCTGGGGA
CTCGTCATCGGCTCACTGGTCAAGAGTTTTGGATAA

Protein sequence :
MKYGTLFKTALILLCMLTAASAFAEPLALPTVSVGMGKVSKPADVAVVLQIFFLMTVLSLAPGLLMMTTSFTRIVVVLSF
LRNAIGTQQAPSNQIIIGLSLFLTFFIMAPVWQQINTQALQPYKAQTISQEEAFKRAVAPVRKFMLSQVREKDLALFLSL
SKLPRPKNADDIPTLTLIPAYMVSELKTAFQIGFLVFIPFLVLDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWG
LVIGSLVKSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-25 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 6e-22 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 6e-22 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 6e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001232915.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-44 58
fliP YP_001232915.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-45 55
fliP YP_001232915.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-50 54
fliP YP_001232915.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-48 53
fliP YP_001232915.1 flagellar biosynthesis protein FliP VFG0394 Protein 4e-25 42
fliP YP_001232915.1 flagellar biosynthesis protein FliP VFG0044 Protein 1e-24 41