Gene Information

Name : Gura_3955 (Gura_3955)
Accession : YP_001232674.1
Strain : Geobacter uraniireducens Rf4
Genome accession: NC_009483
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4598731 - 4601325 bp
Length : 2595 bp
Strand : +
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGATCAGACCGGATAAAATGACCATTAAGACCCAGGAAGCCCTGGCCCTTGCCCAGGAAACAGCGGCGCAGCGGGGAAA
CAGCTCCATCGAGCCGGAACATCTGCTGCTGGCCCTGCTGGAGCAGGAAGGGAGCCTGGTTGCCGCAATCCTGCAAAAGC
TCGGCGCCAATGCCGGCTTTGTGAAAAACAAGGCAATGGAAGCGCTCGAAAAACTCCCCAGGGCCAGCGGCGCCACCATG
CAGATCTACCTGTCACCGGCGCTGAACCAGCTGCTGGACGCGGCCCAGAAGGAAGCCGACACCATGAAGGACGCCTTCGT
CTCCAGCGAACACCTGCTTCTGGCGATGATAGCGGCTAAGGGGAGCGCGGCTGCGCGGATACTCATGGAGAGCGGGGTGA
GCCGTGAGGGGGTTCTCGCTGCTTTGAAGGATGTCCGGGGTGAGGAACCGATTACCGATCAGAATCCGGAGGACAAATAC
CAGGCCCTGGCAAAATACGCCCGCGACCTGACCGATCTGGCACGGCGGGGCAAGCTTGATCCGGTCATCGGCAGGGACGA
CGAGATCCGCCGGGTGATCCAGGTCCTGTCACGGCGGACCAAGAACAACCCGGTCCTGATCGGCGAGCCGGGGGTGGGGA
AAACCGCCATCGTCGAAGGGCTGGCCCAGCGTATCATCTCCGGCGACGTGCCGGAAACCCTCAAGGAGAAGAAGCTGGTG
GCCCTCGACATGGGCGCGCTCATCGCCGGGGCCAAATACCGGGGGGAATTCGAAGATCGGCTCAAGGCGGTGATCAAGGA
AGTGGAAAAATCCGAAGGGAAGATCATTCTCTTCATCGACGAGCTTCACACCCTGGTTGGCGCTGGAGCTGCGGAAGGGG
CAATGGACGCATCCAACATGCTCAAGCCCGCCCTGGCAAGGGGTGAGCTGCACTGCATCGGAGCCACCACCCTCAACGAA
TACCGCAAGTACATCGAAAAGGATGCTGCCCTGGAGCGCCGCTTCCAGCAGGTATACACCGGAGAGCCGAGCGTTGAGGA
CACCATCGCCATCCTGCGCGGTCTCAAGGAAAAGTATGAAAACTTTCACGGCATCCGCATCAAGGACAGCGCCATCATCG
CCGCAGCCACTCTCTCCGACCGGTACATCACCGACCGCTTCCTTCCGGACAAGGCCATCGACCTGATCGACGAAGCAGCC
TCCAGGCTCCGGATCGAGATCGACTCCATGCCGACCGAGATCGACGAGGTGGAGCGCAAGATCATCCAGCTGGAAATTGA
GAAACAGGCCCTGCTCCGCGAGCAGGACCCCCATGCCCAGGAGCGGCTAAAGAAGCTCTCCGATGAGCTGGAAGAGCTGA
AAGGCCAGTCGGCAACCCTCAAGACACACTGGCAGCAGGAAAAAACGATCCTGACCGCCATCAGTGACCTGAATAAAAGA
TTGGAAGAGAAGAAGGAAGAAGCAAAGAAAAGCGAGCGGGAAGGAAACCTGGCCAAAACCGCCGAACTCCGTTACGGTGA
GATTCCCGCCATCGAGAAGGAAATCGCCGAAAAGAAGGAGGAACTGACCCGGCGGCAAGAGGAAGGGAAGATGCTCCCCG
AAGAGGTTGACGGCGACATGGTGGCGGAGATCGTCGCCAAGTGGACCGGCATCCCGGTCAGCCGCATGCTGGAAACCGAA
TCGGAAAAACTGGTCAGAATGGAAGAGCGGCTGAAGAGCCGGGTAGTCGGCCAGGATGATGCCCTCACCCTGGTCGCCAA
TGCGGTGCGCAGGGCGCGCTCCGGGCTCTCCGACCCCAACCGCCCCATCGGCTCCTTCATCTTCCTCGGCCCTACCGGTG
TGGGCAAGACCGAGACTGCACGGGCTTTGGCCGCGTTTCTTTTCGACGACGACCAGTCCATCGTCCGCATCGACATGAGC
GAATACCAGGAAAAGCACACGGTGGCCCGGCTCATCGGTGCGCCCCCCGGTTATGTGGGCTACGAGGAAGGTGGCCAGCT
CACCGAGGCGGTGCGCCGTCGCCCATACAGCATCGTCCTCTTCGACGAAATCGAAAAGGCGCATCCCGAAGTTTTCAACG
TGCTGCTCCAGGTGCTCGACGACGGCCGGCTCACCGACGGCCATGGGCGCACCGTGGATTTCCGCAACACGGTCATCATC
ATGACCAGCAACCTGGGCTCCCAGTGGATTCAGCAGTACGGCGTCAGCGACTACGCCAGGATGCGGACCATGGTCATGGA
AACCCTCAAGGAGAACTTCAAGCCGGAATTCCTCAACCGGCTGGACGAGATCGTCATCTACCACGCCCTCCCCCTCGATC
AGATCAAACATATCGTCGCGATCCAGATCAAGGCCCTGCAAGACCGCCTTGCGGAACGTCACCTGACGCTGGAGATCACC
GACAAGGCCCGCGAATTCCTTGCCCATGAAGGATACGATCCAGCCTACGGCGCCCGGCCGCTGAAACGGACCCTGCAGAA
AAAAATCCAGGACCCGCTGGCGCTGATGCTCTTGCAGGGGAAATTCGAGGAGGGGGATATTGTCCAGGTGGACCTTGCCA
TGACCGGTGACAGCTTGGTGATAAAGAAGAAATAG

Protein sequence :
MIRPDKMTIKTQEALALAQETAAQRGNSSIEPEHLLLALLEQEGSLVAAILQKLGANAGFVKNKAMEALEKLPRASGATM
QIYLSPALNQLLDAAQKEADTMKDAFVSSEHLLLAMIAAKGSAAARILMESGVSREGVLAALKDVRGEEPITDQNPEDKY
QALAKYARDLTDLARRGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIISGDVPETLKEKKLV
ALDMGALIAGAKYRGEFEDRLKAVIKEVEKSEGKIILFIDELHTLVGAGAAEGAMDASNMLKPALARGELHCIGATTLNE
YRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYENFHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAA
SRLRIEIDSMPTEIDEVERKIIQLEIEKQALLREQDPHAQERLKKLSDELEELKGQSATLKTHWQQEKTILTAISDLNKR
LEEKKEEAKKSEREGNLAKTAELRYGEIPAIEKEIAEKKEELTRRQEEGKMLPEEVDGDMVAEIVAKWTGIPVSRMLETE
SEKLVRMEERLKSRVVGQDDALTLVANAVRRARSGLSDPNRPIGSFIFLGPTGVGKTETARALAAFLFDDDQSIVRIDMS
EYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGHGRTVDFRNTVII
MTSNLGSQWIQQYGVSDYARMRTMVMETLKENFKPEFLNRLDEIVIYHALPLDQIKHIVAIQIKALQDRLAERHLTLEIT
DKAREFLAHEGYDPAYGARPLKRTLQKKIQDPLALMLLQGKFEEGDIVQVDLAMTGDSLVIKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-105 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gura_3955 YP_001232674.1 ATPase VFG2076 Protein 9e-115 43
Gura_3955 YP_001232674.1 ATPase VFG2084 Protein 2e-106 41