Gene Information

Name : Gura_3240 (Gura_3240)
Accession : YP_001231974.1
Strain : Geobacter uraniireducens Rf4
Genome accession: NC_009483
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 3803658 - 3805142 bp
Length : 1485 bp
Strand : -
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type

DNA sequence :
GTGGCGATAGAAGAGTTGAGTGAATTGTTGTTGCAGAGAAGACGTAAGGTTGACACCATGTGGGAGGCGGGGGTAAACCC
TTATCCCAATGACTTTAAGCCGCAGCATACTTCGGCTGATCTGTTTGCCGCCTATGGCGGTTCGGAGACCATTGATGAAG
ATCCGCCCAATTTTGTAGTAGCCGGCAGGATCATTGCCCGCCGCTCTTTCGGCAAGGCGGCTTTTGTCCAGTTGCAGGAT
CGCAAGGGGCGCTTCCAGCTCTATGTGAAGAAAGACGCAATCGGCGATGAGGTTTTCGGCCAGTTTGAGTCCTTTGATAT
AGGCGATATTGTCGGCGCTGTCGGCTACCCGTTTCGCACCAAAACCGGCGAGCTTTCTCTCCATGTACTGGAGATAAGGT
TGTTGACAAAATCCCTTCTTCCTTTGCCCGAGAAGTTTCATGGTCTTACCGATGTGGAGACCCGTTACCGCCAGCGTTAT
GTGGATCTCATCGTCAATCCCGAAGTGCGCGAGGTTTTTGCCAAGCGTTCCAGGATTGTTAATCTGATCCGTGCCTTCAT
GGTAAAAAACGACTTCCTCGAAGTCGAAACGCCGATGATGCAGCAGATTCCCGGGGGAGCCACGGCACGCCCTTTCGTTA
CCCACCACAATGCGCTCGATATGGAACTCTTTCTTCGCATCGCGCCGGAACTCTACCTGAAGAGGCTGGTGGTGGGAGGG
CTCGACCGGGTTTTTGAAATCAACCGCAACTTCCGCAACGAGGGGATTTCCGTCCGCCACAACCCCGAGTTCACCATGAT
GGAGTTTTACCAGGCTTACGCTACCTTCGAAGACCTGATGAACTTTACGGAAGAGCTCCTCTGCCATGTGGCGCATGACG
TGCTCGGCACACTCGATTTTAGTTACCAGGGAATGCCTATCAGCTTTCAGCGCCCCTGGAAACGATTTACCGTCAAGGAA
GCGATCCTGGAGTACGGGGATATCGATGCCAAATCACTCGAAGACCGCGACATGGCCTTTGCCTATGCAAAACGGATCGG
GCTCGACCTCCCAGAGGATATCGGCTACGGCAAGCTGGTTACCGAAATATTCGAGGAGGTCGCAGAAACCAAACTGATCC
AGCCGACGTTCATCACCGCTTATCCAACCGAGGTGTCCCCACTGTCCCGCAAAAACGACCATGACCCGGAGATTGTCGAC
CGTTTCGAGTTTTTCTGCGCCGGACGGGAAATGGCCAACGCATTTTCCGAGCTCAACGATCCGGTGGATCAGAAGGAACG
TTTCCTTGCCCAGGTCGCGGCCAAGGCGAAAGGCGACGAAGAGGCCCACTACATGGATGAGGACTACATCCGGGCTCTTG
AATACGGCCTGCCGCCCACTGCGGGCGAGGGGATCGGCATAGACCGCCTTGTGATGCTCCTTACCGATGCGCCTTCAATC
CGTGACGTCATTCTCTTCCCGCAATTGCGGAAAGAAGTGAAATAA

Protein sequence :
MAIEELSELLLQRRRKVDTMWEAGVNPYPNDFKPQHTSADLFAAYGGSETIDEDPPNFVVAGRIIARRSFGKAAFVQLQD
RKGRFQLYVKKDAIGDEVFGQFESFDIGDIVGAVGYPFRTKTGELSLHVLEIRLLTKSLLPLPEKFHGLTDVETRYRQRY
VDLIVNPEVREVFAKRSRIVNLIRAFMVKNDFLEVETPMMQQIPGGATARPFVTHHNALDMELFLRIAPELYLKRLVVGG
LDRVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVAHDVLGTLDFSYQGMPISFQRPWKRFTVKE
AILEYGDIDAKSLEDRDMAFAYAKRIGLDLPEDIGYGKLVTEIFEEVAETKLIQPTFITAYPTEVSPLSRKNDHDPEIVD
RFEFFCAGREMANAFSELNDPVDQKERFLAQVAAKAKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDAPSI
RDVILFPQLRKEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-128 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gura_3240 YP_001231974.1 lysyl-tRNA synthetase VFG1668 Protein 2e-128 57