Gene Information

Name : Gura_2183 (Gura_2183)
Accession : YP_001230943.1
Strain : Geobacter uraniireducens Rf4
Genome accession: NC_009483
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2542551 - 2543657 bp
Length : 1107 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGGAACATTTTCACGAAAAAATGATGAAACGCGCCATTGTCCTGGCGAAACGGGGGATTGGCAGAACTGCGCCGAACCC
GACGGTAGGGTGCGTGATTGTTAAAGACGGCGCGGTTGTGGGGGAGGGGTGGCATAAAAAGGCCGGTACCCCCCATGCCG
AGGTCCATGCGTTGCGACAAGCCGGCGAAATGGCCCGGGGCGCCGATGTCTATGTCACCCTTGAACCGTGCGCCCACTTC
GGAAAGACTCCGCCTTGCGCGGATGCACTCATAGCGGCGAAGGTGTGCAGGGTCCATATCGGCATGGTTGATCCCAATCC
CAGGGTATGCGGCGAGGGGATCTCGATGCTCCGCTCGGCCGGCATTGAGGTCGTCGTTTCCGTCCTTGAGGATAACTGCC
GCTCGTTGAACGAGCCTTTCATCAAGCATATGACCACCGGCCTTCCTTTTGTCATCCTGAAAAGCGCCATGACGCTGGAC
GGGAAAACAGCCACAGCCGGTAAAGACTCCAAATGGATAACCAGTGATAAATCAAGGCAATATGTTCACAAACTTCGAGC
AAAGCTTGATGCGATAATGGTGGGGGTCGGCACCGTCATGGCAGATGACCCGCTTCTTACCTCCAGAATTCCCGCCGGCA
GGGACCCGCTGCGCGTTATTGTCGACTCCACCTTGCGAATTCCACTGTCATCGCAGGTTCTTCATGTCGACTCCCCTGCT
AAAACGGTTATTGCCACGATTTCCGACGATGAAGCGCAGGCTGCCCGGATAACGGCTTCTGGTGCCGACGTCCTGCGCTG
TCGGCAGAAGAATGGCCGCGTTGATCTCCACGATTTGTTCGTCAAGCTCGGCGGACTGGGGGTGCAGTCGCTTCTCCTCG
AAGGGGGAGGAGCGCTTGCCGGTGAAGCGCTGCGTTGCGGGTTGATCGACAAGTGCATGTTTTTCTATGCGCCGAAATTG
GTCGGCGGCGAAGGTTTAGGCCCATTCTCCGGCAAAGGGGTAGAGCTTATGGCCGATGCAATAACGCTGAAAAACATTTC
CATTACTAAGATAGGAAGCGATATCCTCGTCCAGGGGTATCCGGAGAACGCATGTTTACAGGTCTGA

Protein sequence :
MEHFHEKMMKRAIVLAKRGIGRTAPNPTVGCVIVKDGAVVGEGWHKKAGTPHAEVHALRQAGEMARGADVYVTLEPCAHF
GKTPPCADALIAAKVCRVHIGMVDPNPRVCGEGISMLRSAGIEVVVSVLEDNCRSLNEPFIKHMTTGLPFVILKSAMTLD
GKTATAGKDSKWITSDKSRQYVHKLRAKLDAIMVGVGTVMADDPLLTSRIPAGRDPLRVIVDSTLRIPLSSQVLHVDSPA
KTVIATISDDEAQAARITASGADVLRCRQKNGRVDLHDLFVKLGGLGVQSLLLEGGGALAGEALRCGLIDKCMFFYAPKL
VGGEGLGPFSGKGVELMADAITLKNISITKIGSDILVQGYPENACLQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-48 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-48 42