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Name : clpB (SynRCC307_0906) Accession : YP_001227162.1 Strain : Synechococcus sp. RCC307 Genome accession: NC_009482 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 824615 - 827206 bp Length : 2592 bp Strand : - Note : Posttranslational modification, protein turnover, chaperones DNA sequence : ATGCAACCAACCGCTGAGCAATTCACAGAGCAGGCCTGGGCTGCCGTGGTGGCCGCTCAGGGCCTGGCGCAGCAACACAA ACAGCAGCAGCTGGAGACCGAACATCTGCTGCTGGCCCTGCTGCAACAAAGCCAAGGATTAACGGTCCGCATCCTGGAGA AGGCTGGTGCTAACGCCGATCTGCTGCGCCAGCAAGTGGAGCTGTATCTGCAACGGCAACCGAGTTTGAGCACAGCTCCT GACAACGTCTACCTGGGCAAGGGACTGCAAAGCCTGCTGGAGCAAGCCGAGCGCAACAAGCAAGAGTTTGGCGATAGCTA CATCTCCATCGAGCACTTACTGCTGGCGTTGGCAGGCGATTCCCGCTGCGGGCGTCAGCTGCTACTGGACAATGGCGTTC AGGACAAAACCCTACGCGAAGCGATCCAAGCGGTGCGCGGCAGCCAACGCGTGACCGATCAAAACCCAGAAGGCACCTAC GAATCGCTGCAGAAATACGGGCGTGATCTCACCGCTGCCGCCCGCGACGGAAAGCTGGACCCGGTGATCGGACGCGACGA AGAGATCCGACGCACCATCCAAATTCTGAGCCGCCGCACCAAAAACAACCCGGTGCTGATCGGCGAACCCGGAGTGGGTA AAACGGCGATTGTTGAAGGCCTGGCCCAGCGCATCGTCAATGGCGATGTGCCATCCGCGCTGCAAAACCGGCAATTGATT GCCCTGGATATGGGTGCCTTGATTGCCGGCGCCAAGTACCGCGGTGAGTTCGAAGAACGGCTCAAGGCCGTGCTCAAAGA AGTCACCAGCAGCGATGGTCAGATCGTGCTGTTCATCGATGAAATCCACACCGTGGTGGGAGCCGGCGCCACAGGCGGCG CCATGGATGCCAGCAACCTGCTCAAGCCGATGCTGGCCCGCGGCGAGCTGCGCTGCATCGGTGCCACCACCCTCGATGAG CACCGCCAACACATCGAAAAAGACCCGGCCCTAGAGCGGCGCTTCCAGCAGGTGTTCGTTGATCAACCAACGGTGGAAGA CACCATCTCCATCCTGCGCGGGCTGAAGGAACGCTATGAAGTGCACCATGGTGTGCGTATCGCCGACACAGCCCTGGTGG CTGCCGCGGTGCTGAGCAGCCGCTACATCGCTGATCGCTTCCTGCCCGATAAAGCGATCGACCTGGTGGATGAATCAGCC GCCCGGCTGAAGATGGAGATCACCTCCAAGCCGGAAGAGATCGATGAAATCGATCGCAAGATCCTGCAGCTGGAGATGGA GAAGCTCTCGCTGGGGCGCGAATCTGATAGCGCCAGCCTCGAACGGCTGGAACGCATCGAGCGCGAGCTGGCTGAGCTCG CCGAACAACAGAGCAGCCTCAATGCGCAATGGCAAAAGGAGAAAGGCGCCATTGATGCCTTGCAGTCCCTCAAAGAGGAG ATTGAGCAGGTGCAGCTGCAGGTGGAGCAGGCCAAGCGCAACTACGACCTCAACAAAGCCGCTGAGCTGGAATACGGCAC CATGGCCGAGTTAAATCGCCAACTCGAGAGCAGCGAAGCCGAGCTAGCCGCCAGTGAAGGCGAAGCCAACCAACTGCTGA GGGAAGAGGTCACCGAAGACGACATCGCTGAGGTGATCGCCAAGTGGACCGGGATCCCGGTGAGCAAGCTGGCGCGCTCG GAGATGGAAAAACTTCTCGAACTCGAAGAGCACTTGCACCAGCGCGTGATTGGACAAGGCGATGCGGTTCGTGCCGTTGC CGATGCGATCCAACGCTCCCGCGCTGGGCTCTCCGATCCCCGCCGGCCCATTGCCTCATTCCTCTTCCTTGGCCCCACCG GTGTGGGCAAAACCGAGTTGAGCAAAGCCCTCGCCAACCAACTGTTCGACAGCGATGACGCCATGGTGCGCATCGACATG AGCGAATACATGGAGAAGCACGCCGTCAGTCGTTTGATCGGCGCGCCTCCGGGTTATGTGGGCTTTGAAGAAGGGGGTCA GCTCACCGAAGCGGTGCGCCGCCGGCCCTATGCGGTGATCCTGTTTGACGAGGTGGAAAAAGCCCACCCCGATGTCTTCA ACGTGATGCTGCAGATCCTCGATGACGGCCGCGTCACCGATAGCCAAGGGCGCACGGTGGACTTCACCAACACCGTGCTG ATCCTCACCAGCAACATCGGCAGCCAATCGATCCTCGATCTTGGCGGGGATGACAGCCGCCATAGCGAGATGGAAGAGCG GGTGAATGAGGCACTACGGGCTCACTTCCGCCCGGAATTCCTCAATCGCCTCGATGAAACGATCATCTTCCATAGCCTCA GGGCCGATGAGCTGCGTCACATCGTTGATCTGCAGGTGCAACGGTTGGCCCAACGCTTGGCTGAACGCAAGATCCAGCTT GAGCTGAGCGCGCGAGCCTCCGACTGGCTGGCCACCGCGGGCTATGACCCGGTCTATGGCGCGCGCCCACTCAAACGGGC GATTCAGCGGGAGCTGGAAACGCCGATCGCCAAGGCAATCCTGGCAGGCCGCTACAGCGAAGGCAGCACAGCCGCCGTTG ACGTCGAGGATGAGCGTCTCAGCTTTGGCTGA Protein sequence : MQPTAEQFTEQAWAAVVAAQGLAQQHKQQQLETEHLLLALLQQSQGLTVRILEKAGANADLLRQQVELYLQRQPSLSTAP DNVYLGKGLQSLLEQAERNKQEFGDSYISIEHLLLALAGDSRCGRQLLLDNGVQDKTLREAIQAVRGSQRVTDQNPEGTY ESLQKYGRDLTAAARDGKLDPVIGRDEEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPSALQNRQLI ALDMGALIAGAKYRGEFEERLKAVLKEVTSSDGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGATTLDE HRQHIEKDPALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRIADTALVAAAVLSSRYIADRFLPDKAIDLVDESA ARLKMEITSKPEEIDEIDRKILQLEMEKLSLGRESDSASLERLERIERELAELAEQQSSLNAQWQKEKGAIDALQSLKEE IEQVQLQVEQAKRNYDLNKAAELEYGTMAELNRQLESSEAELAASEGEANQLLREEVTEDDIAEVIAKWTGIPVSKLARS EMEKLLELEEHLHQRVIGQGDAVRAVADAIQRSRAGLSDPRRPIASFLFLGPTGVGKTELSKALANQLFDSDDAMVRIDM SEYMEKHAVSRLIGAPPGYVGFEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDSQGRTVDFTNTVL ILTSNIGSQSILDLGGDDSRHSEMEERVNEALRAHFRPEFLNRLDETIIFHSLRADELRHIVDLQVQRLAQRLAERKIQL ELSARASDWLATAGYDPVYGARPLKRAIQRELETPIAKAILAGRYSEGSTAAVDVEDERLSFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001227162.1 | chaperone ClpB | VFG2076 | Protein | 2e-110 | 43 |
| clpB | YP_001227162.1 | chaperone ClpB | VFG2084 | Protein | 2e-102 | 43 |
