Gene Information

Name : hemC (SynRCC307_0896)
Accession : YP_001227152.1
Strain : Synechococcus sp. RCC307
Genome accession: NC_009482
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 813410 - 814363 bp
Length : 954 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGACGGCCTCTTCTTTGCGTATTGCCTCTCGCCGCAGCCAATTGGCGATGGTTCAGACCGAGTGGGTGCGTGATGAGCT
CGCCAACGCTCACCCCGGTCTGGAGATCAGCATCGAGGCGATGGCCACCCAGGGCGACAAGATTCTCGATGTGGCCCTGG
CCAAGATTGGCGACAAGGGACTGTTCACCAAAGAGCTAGAAGCTCAAATGCTGGTGAACCGGGCTGATATCGCTGTTCAT
AGCCTCAAAGATCTGCCCACCAACCTTCCAGAAGGGCTGATGCTCGGCTGCATCACCGAGCGGGAAGATCCTGCCGATGC
CCTGGTGATGCATGCCAAAAACAAAGACCTCACCCTGGCCACCCTGCCTGAGGGTGCCGTGGTGGGCACCAGCTCCCTGC
GCCGTTTGGCCCAGCTCAGGTACCACTACCCGCACCTCACCTTCAAAGATGTGCGCGGCAATGTGATCACTCGCCTCGAG
AAGCTGGATTCCGGTCAGTTCGATTGCTTGATCTTGGCGGCAGCTGGTTTGGGCCGCCTTGGCCTGGGTGATCGCATCCA
TGAGCTGATTGATCCTTCGATCTCCCTGCATGCCGTGGGCCAAGGCGCCTTGGGCATCGAATGCCGCGATGGTGATGCGG
CTGTTCTCGAGCAAATCAAGGTGCTGGAGCACCGCCCCACCTCCCTGCGTTGTTTGGCCGAACGCGCGTTCCTGCGCACC
TTGGAAGGTGGCTGTCAGGTGCCGATCGGCGTGAACACCCGTTTTGAAGGAGATGAGCTGGTGCTCACCGGCATGGTGGC
CAGCCTTGATGGCAAACAACTCATCCGCGACGAGCTCCGCGCGCCTCAAGATCAGGCTGAGGACCTGGGCAATCGCTTAG
CTGAGTTGCTGCGCAGCCAAGGTGCTGGCGAGATCCTCGCCAAGATCTTTGCTGAAGCCCGCCCTGAGGCCTGA

Protein sequence :
MTASSLRIASRRSQLAMVQTEWVRDELANAHPGLEISIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVNRADIAVH
SLKDLPTNLPEGLMLGCITEREDPADALVMHAKNKDLTLATLPEGAVVGTSSLRRLAQLRYHYPHLTFKDVRGNVITRLE
KLDSGQFDCLILAAAGLGRLGLGDRIHELIDPSISLHAVGQGALGIECRDGDAAVLEQIKVLEHRPTSLRCLAERAFLRT
LEGGCQVPIGVNTRFEGDELVLTGMVASLDGKQLIRDELRAPQDQAEDLGNRLAELLRSQGAGEILAKIFAEARPEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-58 53
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-58 53