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Name : clpA (SynRCC307_0788) Accession : YP_001227044.1 Strain : Synechococcus sp. RCC307 Genome accession: NC_009482 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit clpA-like protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 717821 - 720379 bp Length : 2559 bp Strand : - Note : Posttranslational modification, protein turnover, chaperones DNA sequence : ATGTTTGAGCGCTTTACCGAGAAGGCCATCAAGGTCATCATGCTGGCCCAAGAAGAGGCCAGACGTCTTGGTCACAACTT CGTTGGCACCGAGCAGATCCTGTTGGGTCTGATTGGAGAAGGCACCGGTGTTGCGGCCAAAGTCTTGAAGTCAATGGGCG TCAACCTCAAAGACGCTCGCGTTGAAGTCGAAAAAATCATTGGCCGAGGCTCCGGCTTTGTGGCCGTTGAGATTCCATTC ACCCCCCGCGCCAAACGCGTCCTCGAGCTCTCCCTCGAAGAAGCCCGTCAGCTCGGCCACAACTACATCGGCACTGAGCA CTTGCTGCTAGGCCTGATCCGCGAAGGTGAGGGCGTCGCCGCGCGCGTTCTTGAAAACCTTGGTGTTGACCTGGCGAAGG TGCGCACCCAAGTGATCCGCATGCTCGGCGAAACCGCCGAAGTGGCCACCGGTGGTGGTGGCAAGGGATCCACCAAGACC CCAACGCTCGACGAGTTCGGCAGCAACCTCACCCAGCTAGCCAGCGAAGGCAAGCTCGATCCCGTGGTTGGTCGCCACAA CGAGATTGATCGTGTCATTCAAATCTTGGGCCGCCGCACCAAGAACAACCCTGTCTTGATTGGTGAACCTGGTGTCGGCA AGACCGCCATCGCCGAAGGGTTGGCTCAGCGGATCCATGCTGGTGAAATTCCCGACATCCTGGAAGACAAGCGTGTTCTG ACGCTGGACATCGGCCTGTTGGTGGCTGGTACCAAATACCGGGGCGAATTTGAAGAGCGCCTCAAGAAGATCATGGATGA GATCCGTGGCGCGGCCAACGTGATCTTGGTGATCGATGAGGTGCACACCTTGATCGGTGCCGGTGCCGCCGAAGGCGCCA TCGATGCCGCCAACATCCTCAAGCCAGCCCTTGCCCGTGGTGAGCTGCAGTGCATCGGGGCCACCACCCTTGATGAATAC CGCAAGCACATCGAGCGCGATGCCGCCCTCGAGCGTCGCTTCCAACCCGTCAACGTTGGCGAACCCTCCGTTGAGGACAC CATCGAAATTCTGATGGGCCTGCGCGAGCGCTACGAAGCGCACCACCGCCTCAAGATCACCGACGATGCCGTGGTGGCCG CCGCCACCCTTGGCGATCGCTACATCTCCGATCGCTTCCTGCCCGACAAGGCCATCGACTTAATCGATGAGGCTGGCAGC CGCGTACGCCTGCTCAATTCCAAGCTGCCCCCAGCGGCGAAAGAGTTGGACAAGCAGCTGCGCGAGGTCCAAAAAGACAA GGAGACCGCCGTTCGCGAGCAGGACTTCACCAAAGCCGGTGAGCTGCGCGAGAAAGAGGTGGAGCTGCGCGAGCAGATCC GCGGCATCACCCAGAACCGCCGCGATGAAGCCAGCAGCGAAGCGTCGGAATCTGGTTCTACTTCGGCCGATGCAACGACA CCTGCCTCCACCACCGCAACGGCTGACACCATTCAGGACAACAGCCCCGTGGTGAATGAAGAGGACATCGCCCAAATCGT GGCGTCCTGGACTGGAGTTCCTGTTCAGAAGTTGACCGAATCCGAGTCGGCCAAGTTGCTGAACATGGAGGAAACCCTCC ACCAGCGCCTCATTGGCCAAGACGAGGCTGTCAAAGCTGTCTCCAAGGCCATCCGCCGCGCCCGCGTCGGTCTGAAAAAC CCCAATCGCCCGATTGCGAGTTTCATCTTCTCCGGCCCCACCGGTGTTGGTAAGACCGAGCTCACCAAGGCCCTGGCGTC GTATTTCTTCGGCAGCGAAGAAGCCATGATTCGCCTCGACATGAGCGAATTCATGGAGCGCCACACGGTCAGCAAGCTGA TCGGTTCGCCTCCCGGTTATGTGGGCTTCAACGAGGGCGGCCAGCTGACCGAAGCGGTGCGCCGCCGGCCCTACACCGTG GTGCTCTTCGACGAAATCGAGAAAGCACACCCCGATGTGTTCAACCTGCTGCTGCAGCTGCTGGAAGACGGTCGTCTGAC CGACTCCAAAGGCCGCACGGTGGACTTCAAGAACACCTTGATCATCATGACCTCGAACATTGGTTCGAAAGTCATCGAGA AAGGCGGCGGTGGTCTCGGCTTTGAGTTCAGCGGCGACGACGCTGAGGAAACTCAGTACAACCGCATTCGCTCACTGGTG AATGAAGAACTCAAGCAGTACTTCCGCCCTGAGTTCCTCAACCGCCTCGACGAGATCATCGTCTTCCGCCAGCTCAACCG TGATGAGGTGAAGCTCATCGCCGACATCATGTTGCGCGAAGTCTTCAACCGCATGAAAGAGAAGGGCATCCTTCTCTCCG TTACCGAAGCCTTCAAAGAGCGCTTGGTGGAAGAGGGCTACAACCCCGCCTACGGCGCCCGCCCGTTGAGGCGTGCGGTG ATGCGCTTGCTGGAAGACTCCTTGGCTGAAGAGTTCCTCGCCGGCCGCCTTAAGGAAGGTGAATCCGCCCTGGTGGATGT CGACGATGACAAGCAAGTGGTCATCCGCCCAGGTGGTACCACCAGCGCTCCGCAGGAGCTGGCCAGCAGCAGCGTCTGA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVATGGGGKGSTKT PTLDEFGSNLTQLASEGKLDPVVGRHNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIHAGEIPDILEDKRVL TLDIGLLVAGTKYRGEFEERLKKIMDEIRGAANVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY RKHIERDAALERRFQPVNVGEPSVEDTIEILMGLRERYEAHHRLKITDDAVVAAATLGDRYISDRFLPDKAIDLIDEAGS RVRLLNSKLPPAAKELDKQLREVQKDKETAVREQDFTKAGELREKEVELREQIRGITQNRRDEASSEASESGSTSADATT PASTTATADTIQDNSPVVNEEDIAQIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVKAVSKAIRRARVGLKN PNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTV VLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGDDAEETQYNRIRSLV NEELKQYFRPEFLNRLDEIIVFRQLNRDEVKLIADIMLREVFNRMKEKGILLSVTEAFKERLVEEGYNPAYGARPLRRAV MRLLEDSLAEEFLAGRLKEGESALVDVDDDKQVVIRPGGTTSAPQELASSSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_001227044.1 | ATP-dependent Clp protease ATP-binding subunit clpA-like protein | VFG0079 | Protein | 0.0 | 57 |
| clpA | YP_001227044.1 | ATP-dependent Clp protease ATP-binding subunit clpA-like protein | VFG0080 | Protein | 9e-147 | 50 |
