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Name : serS (SynRCC307_0547) Accession : YP_001226803.1 Strain : Synechococcus sp. RCC307 Genome accession: NC_009482 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 483610 - 484887 bp Length : 1278 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGCTGGATCAGCGCCTGCTGCGCGACAACCCTGAGCTGATTAGCCAGCAATTGGGCAGGCGCGGCATGGAGGTGGACCT CACCAAGCTGCAGCTGATCGCCAAACAAGAGCGCGACCTCGAAGAGCAGCGCAGCAATCTGCAAGCCGAAGGCAACCGCA CCGGCAAAGAGGTGGGGATGCTGATCAAAGGCGGCGCCGCCCCCGACAGCGATGAGGTGAAGGCCCTGCGCGAAAAGGGC AACCGCATCAAGCAGCAGGTGGCGGTTCTGGAAGAGGAAGAAAAAGGTCTGGAAGCCAAGCTGCGCGAACAGCTGCTGGC CCTGCCCAACCTGCCCTCAGCCGATGCCCCCGAGGGCAAAAGCGAGGCCGACAACGTTGAGGTGAAGCGTTGGGGCGAAC CGCGCCAGGGCAAAGACCTCGAAGAGCACTGGCAGCTGGCTGATCGCCTCGGCCTGTTTGAAACTGAGCGCTCCGTGCGC ATTGCCCAGAGCCGTTTCATCACCTTGATGGGGGATGGCGCCCGGCTAGAGCGCGCCCTGATCAGCTTCATGCTCGATCT GCACAGCACCAAGGGCTACACCGAGGTGATGCCGCCGATCCTGGTGAACAGCGCCAGCCTCACCGGATCCGGCCAGCTGC CCAAATTCGCCGAAGAAAGCTTCCGCTGCGCCGACGACGACCTCTGGCTCACCCCCACCGCCGAAGTGCCGCTCACCTCG CTGCATCGCGATGAGGTGATTGCCGTTGAGCAGCTGCCGCTCAAGTACGCCGCCTACACGCCCTGCTTCCGCCGTGAAGC CGGCAGCTACGGGCGCGACACCCGCGGCCTGATTCGCCTGCACCAGTTCAACAAGGTTGAGCTCTATTGGTTCTGCCACC CCGAAAAATCAGCTGAGGCCCACGAGCAGCTGACACTCGATGCCGAAGCCGTTCTGGAAGCCCTCGAGCTGCCCTACCGG CGCCTGGAGCTCTGCACCGGCGACATGGGCTTCTCGGCGGCCCGCACCTACGACCTGGAGGTGTGGCTGCCTGGAGCTGG CTCCTACCGGGAAATTTCCAGCTGCAGCACCTGCGGTGATTTCCAAGCGCGGCGCTCAGCCATTCGCTTCAAAGAGGGCA AAGGCACCCAGCTGCTGCACACCCTCAATGGCAGTGGCCTAGCGATCGGTCGCACCATGGCGGCCCTGCTGGAGAACGGT CAGCAGCCCGACGGCAGCATCCAATTGCCCGCTGCGTTGGTGCCGTACTTCGGTCGCGAACGACTCACGCCACAATGA Protein sequence : MLDQRLLRDNPELISQQLGRRGMEVDLTKLQLIAKQERDLEEQRSNLQAEGNRTGKEVGMLIKGGAAPDSDEVKALREKG NRIKQQVAVLEEEEKGLEAKLREQLLALPNLPSADAPEGKSEADNVEVKRWGEPRQGKDLEEHWQLADRLGLFETERSVR IAQSRFITLMGDGARLERALISFMLDLHSTKGYTEVMPPILVNSASLTGSGQLPKFAEESFRCADDDLWLTPTAEVPLTS LHRDEVIAVEQLPLKYAAYTPCFRREAGSYGRDTRGLIRLHQFNKVELYWFCHPEKSAEAHEQLTLDAEAVLEALELPYR RLELCTGDMGFSAARTYDLEVWLPGAGSYREISSCSTCGDFQARRSAIRFKEGKGTQLLHTLNGSGLAIGRTMAALLENG QQPDGSIQLPAALVPYFGRERLTPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-80 | 47 |
