Gene Information

Name : mntB (SynRCC307_2188)
Accession : YP_001228444.1
Strain : Synechococcus sp. RCC307
Genome accession: NC_009482
Putative virulence/resistance : Virulence
Product : ABC-type Mn2+ transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1898811 - 1899653 bp
Length : 843 bp
Strand : +
Note : See Bartsevich and Pakrasi EMBO Journal 1995 14(9):1845-53; Inorganic ion transport and metabolism

DNA sequence : 
ATGATCACTTGGCTGCTGGAGCCCTTAAGCCACGACTTCATGGTCAGGGCCCTGTTGGTCAGCGCTCTAGTTGGCGGGGT
CTGCGGCCTGCTGTCCTGTTACATGACGCTCAAGGGCTGGGCCTTGATGGGCGATGCCGTCTCCCATGCGGTGTTGCCTG
GGGTGGTGTTGGCCTATGCCCTGGGGTTGCCGTTCTCGCTGGGGGCTTTTGTCTTTGGCGTCGGCTCGGTGACGGCGATC
GGTTTTGTCAAACAGAAATCCAGGGTGAAAGAAGACACCGTGATTGGACTGGTGTTCACCGGATTTTTTGCCTTGGGCTT
GGTGCTGGTCTCTAAGACCCGCAGCAACATCGACCTCACTCACATCCTGTTTGGCAATGTGCTGGGCATCTCCCAGGCCG
ACATCCAGCAAACCCTGCTGATCTCAGCGCTGGTGGTAGCTGTGCTGCTGCTGTTGCGCCGCGACCTGTTGCTGTTCTGT
TTTGATCCCACCCACGCGCGATCGATCGGCATCAACACTGGGCTGTTGCACTACGTGCTGCTCTCGGTGCTGTCCCTGGC
AGCGGTGGCGGGCTTGCAAAGCGTGGGAATCATCCTGGTGGTGGCGATGCTGGTGACCCCTGGTGCCACGGCCTATCTGC
TCACCGACCGCTTTGATCGCATGACCCTGCTGGCCATCACCAGCAGCGTGCTCGCCAGCCTGCTGGGGGTGATCATCAGC
TACTGGAGCGATAGCTCCACCGCAGGCTGCATCGTTCTGGTGCAAACCGGATTGTTCTTGTTGGCATTTCTGTTCGCACC
ACGTCACGGCATCTTTCGCCAACACCCAGAGATAGGTGCCTGA

Protein sequence : 
MITWLLEPLSHDFMVRALLVSALVGGVCGLLSCYMTLKGWALMGDAVSHAVLPGVVLAYALGLPFSLGAFVFGVGSVTAI
GFVKQKSRVKEDTVIGLVFTGFFALGLVLVSKTRSNIDLTHILFGNVLGISQADIQQTLLISALVVAVLLLLRRDLLLFC
FDPTHARSIGINTGLLHYVLLSVLSLAAVAGLQSVGIILVVAMLVTPGATAYLLTDRFDRMTLLAITSSVLASLLGVIIS
YWSDSSTAGCIVLVQTGLFLLAFLFAPRHGIFRQHPEIGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-51 50
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-51 50
sitC NP_461784.1 permease Virulence SPI-1 Protein 5e-51 50
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-51 50
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-51 50
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 4e-42 50
sitD NP_461785.1 permease Virulence SPI-1 Protein 6e-42 50
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-41 49
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-41 49
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-41 49
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 4e-38 43
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 3e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_001228444.1 ABC-type Mn2+ transport system permease BAC0442 Protein 4e-49 51
mntB YP_001228444.1 ABC-type Mn2+ transport system permease BAC0351 Protein 2e-51 50
mntB YP_001228444.1 ABC-type Mn2+ transport system permease BAC0352 Protein 3e-42 50
mntB YP_001228444.1 ABC-type Mn2+ transport system permease BAC0441 Protein 5e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_001228444.1 ABC-type Mn2+ transport system permease VFG0527 Protein 2e-51 50
mntB YP_001228444.1 ABC-type Mn2+ transport system permease VFG0528 Protein 2e-42 50