Gene Information

Name : mntC (SynRCC307_2186)
Accession : YP_001228442.1
Strain : Synechococcus sp. RCC307
Genome accession: NC_009482
Putative virulence/resistance : Virulence
Product : ABC-type Mn2+ transport system periplasmic protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1897103 - 1898056 bp
Length : 954 bp
Strand : +
Note : See Bartsevich and Pakrasi EMBO Journal 1995 14(9):1845-53; Inorganic ion transport and metabolism

DNA sequence : 
TTGACGGCTCATAGGCAGCACTTGGCACGCGGCAAACAGCTGTTGATTGCGCTGCTGAGCTCAGCTCTGATGGCGGGCTG
CACTGCAAGCCCAGAGCTTGAAAAAACCAAACAAGGCAACAACAAGCCGGTGGTGCTCACGACCTTCACCGTGCTGGCCG
ACATGGCCCACCAAGTGGCGGGAGATCGCCTTCAAGTGCGATCGATCGTGAAGCCTGGCGCCGAAATCCATGGCTATGAG
CCCACCCCTAGTGATCTGGAGCAGGCCGCCGGTGCTGATCTGGTGGTGGAGAACGGCCTGGGACTGGAGCTATGGGCCGA
CCGCTTTCTGCGAGCAGCAGGGGATGTGCCCCGTCTCACTCTCAGCCAGGGGATGAAGCCCCTGTTGATTGAAGGCGATG
CCTACGCCGGCAAGCCCAACCCCCATGCCTGGATGTCACCTCAACGGGCGATGGGCTATGTCGATGGCTTGGTGGCGGGT
TTCAGCCAGCTCGATCCTGAGGGCGCGCCGGAGTTCCGCCGCAACGGGGAAAACTACAAACAACAGCTGCAGCAACTGGA
TCAAGAGCTGCGAAGCGGCCTCGCCGAGCTGCCACCACAGCAACGGCTGCTGATCAGTTGCGAAGGGGCGTTCTCCTATT
TGGCCCACGATTACGGCCTGGAGGAGGCCTATCTCTGGCCAGTCAATGCTGAAAGCCAAGTCACACCAAGGCGCATGGCA
CAGCTGATCACCACCATCAAGCAACGCCAAGTCCCAGCAATTTTTTGTGAAAGCACCGTCAGTGATAAGGCCCAACGGGA
AGTCGCCAAGGCCTCAGGCGCCCGCTTTGGCGGTACGTTCTATGTGGATTCCCTCTCGGGCAGCGACGGCCCGGCCGCCA
GCTTGCTTGATCTGCAACGCCACAACGTCAATCTGATCAAGCGCGGACTCGGCAGCGAAGGAGGTGAGCGTTGA

Protein sequence : 
MTAHRQHLARGKQLLIALLSSALMAGCTASPELEKTKQGNNKPVVLTTFTVLADMAHQVAGDRLQVRSIVKPGAEIHGYE
PTPSDLEQAAGADLVVENGLGLELWADRFLRAAGDVPRLTLSQGMKPLLIEGDAYAGKPNPHAWMSPQRAMGYVDGLVAG
FSQLDPEGAPEFRRNGENYKQQLQQLDQELRSGLAELPPQQRLLISCEGAFSYLAHDYGLEEAYLWPVNAESQVTPRRMA
QLITTIKQRQVPAIFCESTVSDKAQREVAKASGARFGGTFYVDSLSGSDGPAASLLDLQRHNVNLIKRGLGSEGGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-68 51
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-68 51
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-68 51
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 7e-69 51
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-68 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntC YP_001228442.1 ABC-type Mn2+ transport system periplasmic protein BAC0349 Protein 4e-69 51
mntC YP_001228442.1 ABC-type Mn2+ transport system periplasmic protein BAC0439 Protein 2e-64 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntC YP_001228442.1 ABC-type Mn2+ transport system periplasmic protein VFG0525 Protein 4e-69 51