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Name : SynRCC307_0020 (SynRCC307_0020) Accession : YP_001226276.1 Strain : Synechococcus sp. RCC307 Genome accession: NC_009482 Putative virulence/resistance : Virulence Product : Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 22525 - 24018 bp Length : 1494 bp Strand : - Note : - DNA sequence : GTGCAGTCCTGCCATGTTGCTGGGACGCCGACCCCTGGATCAAGGTCGGAAAACCCAGCCATCCTGAAAGCAGAGACAGT CCGAGGAGCAGCGTTGGAACGCTTCGAACTCGACGAGAGCTTTGAAAGCTTCGCGCCGCCGCCGCCGCCGGATGGGCCGG ACCTGGTGGAGAGCGCCAACGATCGCGACGCCTCGCCGGTGATTCAGCTGGCGGATCGCATCTTGGTGCAAGCCCTCAGC CGCCAGGCCAGCGACATCCATATCGAACCGCAGGAGGACGGACTGCATGTGCGGCTGCGGCTTGATGGCGTGCTGCAGAA CGCTTTTGAAACCCTGCCGGCCAAGGTAATTCCGGCACTCACCAGCCGCTTCAAAATCATGGCGGACCTGGACATCGCCG AGCGCCGCCAACCCCAAGACGGCCGCATTCGCCGGCGGTATCAAGGCAACACCGTTGATTTCCGCGTCAGCGTGCTGCCA AGCCGCTTCGGCGAAAAAATTGTGCTGCGGCTGCTGGATTCCAGTGCCACCGAACTGGGGCTTGATCTACTCATCACCGA CTCCCAGGCCTTGGCCGAGGTGCGTGACATGGGCAGCAAGCCCTACGGAATCCTTCTCGTCACAGGCCCAACCGGCTCAG GAAAATCCACCACCCTCTACTCGCTGCTGGCCGAGCGCAACGATCCCGGGCTCAACATCTCCACGGTGGAAGACCCGATC GAATACACCCTGGCTGGGATCACGCAAACCCAGGTCAACCGCGAAAAGGGGGTGGACTTCGCCAAGGCCCTGCGGGCCTT CATGCGCCAAGACCCCGATGTGTTGCTGGTTGGGGAAACGCGCGATCTGGAGACGGCCAAAACCGCGCTGGAGGCCGCGC TCACCGGCCACCTGGTGCTCACAACGTTGCACTGCAACGACGCGCCCAGTGCTGTAGCCCGGCTCGAGGAGATGGGGGTG GAGACCTACCTGCTGAGCGCCTCACTGATCGGCGTGCTCTCCCAGCGGTTGCTGCGCAAGCTCTGCACCCACTGCCGCCA GCCCTACCAACCCAAAGAAGCCACCCTGGCCCGCTTCGGTTTAGAAGCCAGCCAAAACAGCTCCATCAGCTTTTTCCAAC CTCCTGCCAACAACACCTGCAGCCATTGCCATGGCCTGGGTTACAAGGGCCGCATCGGCGTGTATGAGGTGATGCGCGTC AATGAGGTGATGGCGGAAGCCATCGGCCAAGGCGCCGGCACCGACCAGCTGCGCCACCTGGCCCTCAGCAATGGCATGAA AACGCTGCTGGGCTACGGGCTGGAACTGGCCCGCCAAGGCCACACCAGCCTGGAGGAGGTGGAGCGGGTGCTGCTGACGG ACTCCGGCCTCGAGCAGGAGATCAGGGCCCGCAACCTCAGCACCGCCACCTGCGTGGGCTGCGGGGCCGGACTGCGCGAT GAATGGCTGGATTGCCCCTATTGCCTAACTCCCAGGGGCACACTGCAGAGATAG Protein sequence : MQSCHVAGTPTPGSRSENPAILKAETVRGAALERFELDESFESFAPPPPPDGPDLVESANDRDASPVIQLADRILVQALS RQASDIHIEPQEDGLHVRLRLDGVLQNAFETLPAKVIPALTSRFKIMADLDIAERRQPQDGRIRRRYQGNTVDFRVSVLP SRFGEKIVLRLLDSSATELGLDLLITDSQALAEVRDMGSKPYGILLVTGPTGSGKSTTLYSLLAERNDPGLNISTVEDPI EYTLAGITQTQVNREKGVDFAKALRAFMRQDPDVLLVGETRDLETAKTALEAALTGHLVLTTLHCNDAPSAVARLEEMGV ETYLLSASLIGVLSQRLLRKLCTHCRQPYQPKEATLARFGLEASQNSSISFFQPPANNTCSHCHGLGYKGRIGVYEVMRV NEVMAEAIGQGAGTDQLRHLALSNGMKTLLGYGLELARQGHTSLEEVERVLLTDSGLEQEIRARNLSTATCVGCGAGLRD EWLDCPYCLTPRGTLQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-67 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-67 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SynRCC307_0020 | YP_001226276.1 | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG1876 | Protein | 1e-74 | 50 |
| SynRCC307_0020 | YP_001226276.1 | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0182 | Protein | 3e-67 | 49 |
| SynRCC307_0020 | YP_001226276.1 | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2426 | Protein | 2e-64 | 48 |
| SynRCC307_0020 | YP_001226276.1 | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2048 | Protein | 1e-68 | 47 |
| SynRCC307_0020 | YP_001226276.1 | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0233 | Protein | 9e-63 | 43 |
| SynRCC307_0020 | YP_001226276.1 | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0112 | Protein | 2e-65 | 43 |
