Gene Information

Name : glnA (SynRCC307_1296)
Accession : YP_001227552.1
Strain : Synechococcus sp. RCC307
Genome accession: NC_009482
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1150983 - 1152401 bp
Length : 1419 bp
Strand : +
Note : Amino acid transport and metabolism

DNA sequence :
ATGGCCAAGACACCGCAGGACATCCTTCGCCAGATCAAGGACGAAGGAATCGAACTCATTGATCTGAAATTTGCCGACGT
CCATGGCAAGTGGCAGCACCTGACTGTGCATAAGGACCTCGTTGAAGAGGAATCCTTCACCGAAGGCCTGGCCTTTGACG
GCTCCTCCATCCGCGGCTGGAAGGCCATCAACGAATCCGACATGGCGATGGTGCCCGATGCCAGCACCGCCTGGGTCGAT
CCGTTCTATGGCGAAAAAACCCTCAGCCTGATCTGCTCGATTCAGGAGCCCCGCAGCGGCCAGCCCTATGAGCGCTGCCC
CCGTGCCTTGGCCCAGAAGGCCATCAATCACCTGGCAAGCACCGGCCTGGCTGACACCGCCTTCTTTGGCCCCGAGCCGG
AATTCTTCATCTTTGATGACGTCCGCTACAACTCCGGCAACGGCAGCAGCTTCTACAGCTGCGATTCAGTTGAGGCTCCC
TGGAACAGTGCCCGCCAAGAAGAAGGCGGCAACCTGGCCTACAAGATCCAACTGAAAGAGGGCTACTTCCCCGTCGCCCC
CAACGACACCATGCAGGACATGCGCAGCGAAATGCTGCTCACCATGGCCAACCTGGGAATCCCTATTGAGAAGCACCACC
ACGAGGTGGCCACCGCCCAACATGAGCTCGGCATGAAGTTCGCCGATCTGATCAGCGCGGCGGACAACGTGATGATTTAC
AAGTACGTCGTGCGCAACGTGGCCCGTAAATACGGCCGCACCGCCACGTTCATGCCAAAGCCTGTCTTTGCCGATAACGG
CAGCGGCATGCACGTGCACCAGAGCCTGTGGAAAGGTGGCCAGCCCTTGTTCTTCGGTGAGGGCACCTACGCCAACCTGT
CCCAAACCGCCCGCTGGTACATCGGCGGCCTGCTCAAGCACGCCCCCAGCTTCCTGGCCTTCACCAACCCCACTACCAAC
AGCTACAAGCGCCTGGTGCCCGGTTTTGAGGCCCCGGTGAACCTGGTGTATTCCCAGGGCAACCGCTCCGCTGCTGTGCG
GATCCCACTCACCGGCCCCAGCCCGAAAGCCAAGCGCCTGGAGTTCCGCTCCGGCGATGCCCTGGCCAACCCTTATCTGG
CCTTCAGCGCCATGCTCATGGCTGGCCTCGACGGCATCAAGAATCAGATCGATCCCGGTGACGGCACCGACGTCGACCTG
TTCGAACTGCCCGCCGAGCAACTGGCCAAGATCTCCACAGTGCCCTCATCCCTCAATGGGGCCCTTCAGGCTCTCGATGC
CGATAAGGACTACCTGCTGGCCGGTGGCGTCTTCACTGAAGACTTCATCGAGAACTGGATTGATCTCAAGTACGAGGAAG
TCCAGCAACTCCGTCAGCGCCCGCATCCCCACGAGTTCACCATGTACTACGACGCCTGA

Protein sequence :
MAKTPQDILRQIKDEGIELIDLKFADVHGKWQHLTVHKDLVEEESFTEGLAFDGSSIRGWKAINESDMAMVPDASTAWVD
PFYGEKTLSLICSIQEPRSGQPYERCPRALAQKAINHLASTGLADTAFFGPEPEFFIFDDVRYNSGNGSSFYSCDSVEAP
WNSARQEEGGNLAYKIQLKEGYFPVAPNDTMQDMRSEMLLTMANLGIPIEKHHHEVATAQHELGMKFADLISAADNVMIY
KYVVRNVARKYGRTATFMPKPVFADNGSGMHVHQSLWKGGQPLFFGEGTYANLSQTARWYIGGLLKHAPSFLAFTNPTTN
SYKRLVPGFEAPVNLVYSQGNRSAAVRIPLTGPSPKAKRLEFRSGDALANPYLAFSAMLMAGLDGIKNQIDPGDGTDVDL
FELPAEQLAKISTVPSSLNGALQALDADKDYLLAGGVFTEDFIENWIDLKYEEVQQLRQRPHPHEFTMYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-102 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001227552.1 glutamine synthetase VFG1399 Protein 1e-125 56