|
Name : thiC (SynRCC307_0129) Accession : YP_001226385.1 Strain : Synechococcus sp. RCC307 Genome accession: NC_009482 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 123610 - 125010 bp Length : 1401 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGCGCAGTGCCTGGATTGAGAAGCGCCGCGGCAGTGCCAATGTCAGCCAGCTCCATTACGCCCGCCAGGGCGTGGTTAC CGAAGAAATGGCCTATGTGGCCAAACGGGAGAACCTGCCGGAATCGCTGGTGATGGAGGAGGTGGCTCGGGGTCGCATGA TCATCCCGGCCAACATCAACCACGCGAATCTGGAGCCGATGGCCATCGGCATCGCCAGCAAGTGCAAGGTGAACGCGAAT ATCGGCGCGTCCCCCAATGCCTCCGATGCCTCGGAAGAGGTGAAGAAGCTGGAGCTGGCTGTGAAATATGGCGCCGACAC CGTGATGGATCTCTCAACCGGTGGCGTGAACCTCGATGAGGTGCGCACGGCGATCATCAACGCGTCGCCAGTGCCTATCG GCACCGTGCCCGTCTACCAGGCCCTCGAGAGCGTGCATGGCTCGATCGAGCGCCTCTCAGAAGATGATTTCCTGCACATC ATCGAGAAGCACTGCCAGCAAGGCGTTGATTACCAAACGATCCATGCGGGCCTGCTGATTGAGCACCTGCCCAAAGTCAA GGGCCGTTTGACCGGGATCGTCAGCCGTGGTGGCGGGATCTTGGCCCAGTGGATGCTCTATCACCACAAGCAGAACCCTC TCTACACCCGCTTTGAAGACATCTGCGAGATCTTCAAGCGCTACGACTGCACCTTCTCCTTAGGTGACTCTTTGCGGCCT GGCTGTCAGCACGATGCCTCTGACGATGCCCAGCTGGCTGAACTCAAGACCCTGGGAGAGCTCACCCGCCGCGCTTGGAA GCATGACGTTCAGGTGATGGTGGAAGGCCCCGGCCATGTGCCGATGGACCAGATCGAGTTCAACGTCAAAAAGCAGATGG AGGAGTGCAGCGAAGCCCCCTTCTACGTGCTCGGTCCACTCGTGACTGACATCGCTCCTGGCTACGACCACATCACCAGT GCCATTGGTGCTGCGATGGCCGGCTGGCATGGCACCGCCATGCTCTGCTATGTCACCCCCAAAGAACACCTGGGTCTGCC GAACGCAGACGATGTGCGGGAGGGCTTAATCGCCTACAAGATCGCTGCCCACGCCGCCGACATTGCCCGACACCGTCCTG GTGCCCGTGACCGCGACGACGAGCTCAGCCGGGCGCGCTACGCCTTCGACTGGAACAAGCAGTTTGAGTTGTCCCTCGAT CCTGAGCGGGCCAAGGAGTATCACGACGAAACCCTGCCAGCCGATATCTATAAGCAGGCAGAGTTTTGCTCGATGTGTGG TCCAAAGCACTGCCCGATGCAAACCAAGATCACTGATAAAGACCTCGAGAGCCTGGAAGAGGTGCTCAAGGCCAAGGGCG GGGCTGAGCTGAGTACGGCCAAGCTCGATCGGGCGGACTAA Protein sequence : MRSAWIEKRRGSANVSQLHYARQGVVTEEMAYVAKRENLPESLVMEEVARGRMIIPANINHANLEPMAIGIASKCKVNAN IGASPNASDASEEVKKLELAVKYGADTVMDLSTGGVNLDEVRTAIINASPVPIGTVPVYQALESVHGSIERLSEDDFLHI IEKHCQQGVDYQTIHAGLLIEHLPKVKGRLTGIVSRGGGILAQWMLYHHKQNPLYTRFEDICEIFKRYDCTFSLGDSLRP GCQHDASDDAQLAELKTLGELTRRAWKHDVQVMVEGPGHVPMDQIEFNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITS AIGAAMAGWHGTAMLCYVTPKEHLGLPNADDVREGLIAYKIAAHAADIARHRPGARDRDDELSRARYAFDWNKQFELSLD PERAKEYHDETLPADIYKQAEFCSMCGPKHCPMQTKITDKDLESLEEVLKAKGGAELSTAKLDRAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-120 | 59 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-120 | 59 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 9e-117 | 56 |
