Gene Information

Name : SynRCC307_1063 (SynRCC307_1063)
Accession : YP_001227319.1
Strain : Synechococcus sp. RCC307
Genome accession: NC_009482
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 958724 - 959059 bp
Length : 336 bp
Strand : +
Note : -

DNA sequence : 
TTGATGCTTCCTGCTTGGTCTTTGCTGCTCCTGGCGATTGCCGCTGAGGTGATCGGCACCTCGTGCCTGAAGCTCTCCGA
TGGTTTCAGCCGATTGTGGCCATCTGTTGTGGTGTTGCTGGCCTACAGCACGTCGATGCTGTTGCTATCGCGGGTGGTGC
AGACCATTCCCTTAGGCATCACCTATGCCCTGTGGAGCGGCATCGGAATTGTGGCCATCGTGCTAGTCGGCGTGTTCGTC
TACAGGCAAGTTCCAACCCCAACCCAGTTGTCAGGCATGGCATTGATCACAGCAGGGGTGGTGATGGTGAATATCACAGG
CCAGCTCAAGGGCTGA

Protein sequence : 
MMLPAWSLLLLAIAAEVIGTSCLKLSDGFSRLWPSVVVLLAYSTSMLLLSRVVQTIPLGITYALWSGIGIVAIVLVGVFV
YRQVPTPTQLSGMALITAGVVMVNITGQLKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 7e-13 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein CP004022.1.gene1549. Protein 3e-13 51
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein BAC0377 Protein 4e-13 50
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein BAC0150 Protein 5e-10 47
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein NC_002695.1.913273.p Protein 7e-10 47
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein BAC0192 Protein 1e-10 46
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein BAC0002 Protein 3e-08 43
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 3e-08 43
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein BAC0322 Protein 2e-10 42
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein BAC0139 Protein 9e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SynRCC307_1063 YP_001227319.1 small multidrug resistance protein VFG1586 Protein 3e-13 42