Gene Information

Name : hemC (SynWH7803_0609)
Accession : YP_001224332.1
Strain : Synechococcus sp. WH 7803
Genome accession: NC_009481
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 610485 - 611444 bp
Length : 960 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCCATGGCTCTCGAGCACCTGCGCATCGCATCCCGCCGCAGCCAGCTGGCCATGGTCCAGACCAACTGGGTGAAAGC
AGAGCTTGAAAAAGCCCACCCTGGCCTGGCGATCTCGGTGGAGGCGATGGCCACCCAGGGCGACAAGATTCTCGATGTGG
CCCTGGCGAAGATCGGTGACAAGGGCCTGTTCACCAAAGAACTCGAAGCGCAGATGCTCGTGGGCAGAGCGGAGATTGCC
GTTCATTCCCTGAAGGATCTGCCCACCAACCTCCCTGAGGGGCTGATGCTGGGATGCATCACCGAACGCGAGGATCCCGC
CGACGCCCTGGTGGTCAACAGCAAGAACGCGGAGCACACCCTGGAAACCCTTCCTGAAGGATCGGTGGTTGGCACAAGCT
CCCTGCGCAGACTGGCCCAGCTACGCCATCACTTTCCCCATCTTCAATTCAAGGATGTGCGCGGGAATGTGATCACCCGC
CTCGAGAAACTCGATGCTGGGCAATACGACTGCCTGATCCTTGCGGCCGCTGGCCTAAGCCGGCTTGGATTCGGGGACCG
CATCCACCAGATCATCCCTGGCCACATCTCCCTGCATGCCGTTGGGCAGGGCGCTCTCGGAATCGAGTGCGTCTGCGATC
GACCTGAAGTCCTGAAGATCATTCAGGTGCTTGAGCATGCACCCACTGCCGGGCGCTGCCTGGCCGAACGGGCTTTCCTG
CGCGAACTGGAGGGTGGATGCCAAGTTCCGATTGGCGTGAACAGCCGCATCGATGGAACGGAGCTGATCCTCACGGGCAT
GGTGGCCAGCCTGGATGGCCAGCGCCTGATCCGTGACGAGCGCCGCGGAAGCCTCACCGATCCCGAAGCCATCGGCCGAG
CATTGGCGGCAGACTTGAAATCCCGCGGTGCGGGAGAGATCCTTCAGGAGATCTTCGCAGAGATGCGCCCCGAAGCGTAA

Protein sequence :
MSMALEHLRIASRRSQLAMVQTNWVKAELEKAHPGLAISVEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVGRAEIA
VHSLKDLPTNLPEGLMLGCITEREDPADALVVNSKNAEHTLETLPEGSVVGTSSLRRLAQLRHHFPHLQFKDVRGNVITR
LEKLDAGQYDCLILAAAGLSRLGFGDRIHQIIPGHISLHAVGQGALGIECVCDRPEVLKIIQVLEHAPTAGRCLAERAFL
RELEGGCQVPIGVNSRIDGTELILTGMVASLDGQRLIRDERRGSLTDPEAIGRALAADLKSRGAGEILQEIFAEMRPEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-63 51
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-63 51