|
Name : rph (SynWH7803_0320) Accession : YP_001224043.1 Strain : Synechococcus sp. WH 7803 Genome accession: NC_009481 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 344549 - 345274 bp Length : 726 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAACACCACCTCCCGCAAGGACGGACGCCAAGCATCCGCACTCAGGCCCTTCGCCGTTGAATGGGATCCCATGGGCTT CGCCCTCAGCTCCGTGATCGTGCGCACCGGCCGAACCGCTGTGCTCTGCAGCGTTTGCCATGAAGAAGGCGTGCCCCGTT GGCGCCGTGACCAGGGCCTCGGCTGGCTCAGCGCGGAATACCGGCTGCTTCCGGGGTCCACCCCCGAACGCCAGCGACGG GAATGGCTCAAGCTCTCCGGCCGCACCCAGGAGATTCAACGCCTGATCGGTCGCAGCTTGCGCGCAGCACTCTCCATGGA GGCACTTGGGGAGAACACCCTGCTGATCGACTGCGACGTGATTCAGGCTGATGCGGGCACACGCACGGCCTCGGTCACTG GAGCCTGGCTTGCCCTGCAGAACGCCTGTGAATCCCTCGTGAAGCAGGGAGTGCTGCAGAGCAATCCGGTCTGCTCGCAG GTGGCAGCCGTTTCGGTGGGACTGCTCGGAGGCGAGGCCCTGCTTGATCTGGATTACAGCGAGGATTCCCAGGCTGACGT GGACCTCAACGTGGTGATGAATGACAGTGGCGAGCTGCTGGAACTTCAGGGCACAGCGGAAGGCAAAGCCTTCAGCAGAC AGCAACTGAACCTGCTCCTCGACCGCGCGGAGCCTGGACTGAAGCAACTGATGGACGCCCAGAAGGAAGCGCTACGACTG CGCTGA Protein sequence : MNTTSRKDGRQASALRPFAVEWDPMGFALSSVIVRTGRTAVLCSVCHEEGVPRWRRDQGLGWLSAEYRLLPGSTPERQRR EWLKLSGRTQEIQRLIGRSLRAALSMEALGENTLLIDCDVIQADAGTRTASVTGAWLALQNACESLVKQGVLQSNPVCSQ VAAVSVGLLGGEALLDLDYSEDSQADVDLNVVMNDSGELLELQGTAEGKAFSRQQLNLLLDRAEPGLKQLMDAQKEALRL R |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 7e-47 | 52 |
