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Name : clpB (SynWH7803_2377) Accession : YP_001226100.1 Strain : Synechococcus sp. WH 7803 Genome accession: NC_009481 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2195348 - 2198113 bp Length : 2766 bp Strand : - Note : - DNA sequence : ATGACGTCTGCCTACGAAGGGAGCTTCCAGCCTCCAGCCAGCCTCACTGCCGAACCTGAGCGTTTCAGCGATCAGGCCTG GGATCTGTTGCTGAGTTCCCAGGACGTTGCCAGGCGTTGGCGTCATGGAGATCTCGATGTGGAGCACCTGCTCCAGGTGC TGTTCGCCGATCCTCGTTACCAGGCGGAGGTGGCTGTGCTTTCAGTCCCCCGCGACCGTCTCCTTGATCAGCTCGAAGCG TTTCTTGCCGAGCAACCCACCGCCCGCGGTCAGGATCTGTTCATTGGGGAAGACCTCGAACGCTTGCTGGAGTCGGCCGA TGCTGTGCGCGGGCTGTGGGGCTCTCGTCTGATCGATCTGTCCCACTTGATCATTGCGATCGGCCGTGATCCGCGCATTG GCGAAGATCTGCTCTCCCGCTTCGGGCTGACGCCGGACCGTTTGGAGGCGGAGCTGCGCCGGGCTCCGGATCCTGGCCCT GGCGCGACGATCCAAGTCCCCGCACAAGGGGCTTCATCACAGGCTCCGTCCTTCCCGGTCCCGCCGTCTGCTCCGGCACC GCCGCCCGCTCCCGCAGCGCCACCGGCGCCTGCCCAAACGACCGACGCCTTGCCTGAGCCGGCCCCTGCGGCTGAGGCAA CAGCCCTTGAGCGCTTTGGTCGGGATCTCACGGCGGAAGCTGCTGATGGCCAGCTGGATCCAGTGGTGGGAAGGGATGTT GAGATTCGCAGCCTGATCAAAGTGCTGTCCCGCCGCGGCAAGAACAACCCAGTGCTGATCGGTGCTCCGGGTGTGGGAAA AACGGCGATTGCTGAACTGCTCGCCCAGCGGATGGTGGCTGGTGAAGTGCCTGAATCGCTTCAAGGCCTGCGGCTTGTGG CGTTGGATGCCGGAGCGCTGATTGCCGGTGCCAAGTTCCGTGGACAATTCGAGGAGCGCCTGCGCGAGGTGTTGCAGGAG GTGAGTGATCCGGAAGCGGGTGTGGTGCTGTTCATCGATGAACTGCACACGGTGGTGAACAGTGATCGCAGCAGTGCCGA TGCCGGAAGCCTGCTCAAGCCTGCGCTGGCGCGGGGCGATCTGCGCTGCATCGCCGCCACCACACCCGAGGATTACCGGC GCACTGTTGAAAAAGACCCTGCACTGAACAGGCGTTTTCAGCAGGTGCCCATCGCGGAGCCTTCCATCGATCACAGCATC GAGATCCTTCGTGGGGTGAAGGAGCGCTATGAGCTGCACCATGGGGTCACGATCACGGACGCCGCGGTCACCGCAGCCGC CCGGCTCGCCGATCGCTACATCAGCGACCGCTGCCTGCCCGATAAGGCGATCGATCTGATCGACGAGGCGGCCGCTCAGC TCAAGATGGATGTGACCTCCAAACCCCAGGTGGTGGAAGACGCCGAGATGGCCTTGCGCCGGGTGGAGTTGTCGGTGCTT GCGGCGGAACAGGCGCCTGAAGCGGAACGTGTTCAGCTGCAGCGTCAAAGACTGGAGGCCACCACGCACTTGTCCCGGTT GCGGGAGCGTTGGCAGGCCGAACGCGCCCAGCTCGAGGAGCTGCGCCAGCTGCTGCAGGAGGACGAAGATCTCCGCCATG CCATGGCCGAGGCGGAACGCGAGGGAGACCTCGAGGAGGCTGCGCGCCTGCAATACGACCAGCTCCATCGACTCCAGCAG CGCCGCGACGCTCTCGAGCAGTCCCTCAGTGATGCCCAAGCTGCTGGAACCGCGCTGCTGCGCGAACAGGTGGAGGCCGC GGATATTGCCGACGTGGTGGCGCGCTGGACTGGGATCCCGGTCCAGCGGCTGCTGGCAGGGGAACGCCAGAAACTGCTGG AGCTGGATCAACGGTTGCAAGAGCGGGTGATCGGGCAACCGGAGGCCGTGCAGGCCGTGGCGGCTGCGATCCGCAGGGCG CGTGCCGGCATGAAGGATCCGCGCCGGCCAGTGGGGTCCTTCCTCTTCTTGGGGCCGACCGGTGTGGGCAAGACCGAGCT GGCCAAGGCCCTCTCGGGTCAACTCTTTGATGAAGAGGAGGCGATGGTGCGTCTCGACATGAGCGAGTTCATGGAGCGCA ATGCCGTGGCCCGCTTGTTGGGTGCTCCTCCGGGCTATGTCGGCTACGAGGAAGGCGGTCAGCTCACCGAGGCCGTGCGT CGTCGTCCCTATGCCCTGCTCCTGCTTGATGAGGTGGAGAAGGCCCATCCAGACGTCTTCAATGTGCTGCTGCAGGTGCT CGACGACGGCCGGCTCAGTGATTCCCAGGGGCGCACCGTTGATTTCCGTCACACGGTGGTTGTGATGACCAGCAATCTCG CCAGTCGGGCCATCCTTGAGGCAGCGCGATCAGGCCAGGAGTCGGACCCTCAAGCCGCATCTCCGTCATTGGATGCGGCG GTGGATGAAGCGCTTAACAGCCATTTTCGGCCTGAATTTCTCAACCGCATCGATGAGGTGATTCGGTTTCGACCGCTCGA TCAGCAGGATTTGAGCCGGATTGTGCGCTTGCAACTGGCTGATCTGTCCAGGCTTCTGCGGGAGCAGGGACTCTCCCTCG AGGTTGACGCCGCCGTGATCGATGCCCTCGTGAGCCTGGGGTATGAACCTGAGTACGGCGCCAGACCCCTGCGCCGTGTG TTGCGCCGCCGCCTGGAAAACCCCCTGGCGACGGAATTGCTCGAAGATCGCTTCCACGGTGCCCAAACCGTGCTGGTCCA CGCTGGCGCTTCGCCCGCTGAACCCTTCAGGTTTGAACCTGCTTGA Protein sequence : MTSAYEGSFQPPASLTAEPERFSDQAWDLLLSSQDVARRWRHGDLDVEHLLQVLFADPRYQAEVAVLSVPRDRLLDQLEA FLAEQPTARGQDLFIGEDLERLLESADAVRGLWGSRLIDLSHLIIAIGRDPRIGEDLLSRFGLTPDRLEAELRRAPDPGP GATIQVPAQGASSQAPSFPVPPSAPAPPPAPAAPPAPAQTTDALPEPAPAAEATALERFGRDLTAEAADGQLDPVVGRDV EIRSLIKVLSRRGKNNPVLIGAPGVGKTAIAELLAQRMVAGEVPESLQGLRLVALDAGALIAGAKFRGQFEERLREVLQE VSDPEAGVVLFIDELHTVVNSDRSSADAGSLLKPALARGDLRCIAATTPEDYRRTVEKDPALNRRFQQVPIAEPSIDHSI EILRGVKERYELHHGVTITDAAVTAAARLADRYISDRCLPDKAIDLIDEAAAQLKMDVTSKPQVVEDAEMALRRVELSVL AAEQAPEAERVQLQRQRLEATTHLSRLRERWQAERAQLEELRQLLQEDEDLRHAMAEAEREGDLEEAARLQYDQLHRLQQ RRDALEQSLSDAQAAGTALLREQVEAADIADVVARWTGIPVQRLLAGERQKLLELDQRLQERVIGQPEAVQAVAAAIRRA RAGMKDPRRPVGSFLFLGPTGVGKTELAKALSGQLFDEEEAMVRLDMSEFMERNAVARLLGAPPGYVGYEEGGQLTEAVR RRPYALLLLDEVEKAHPDVFNVLLQVLDDGRLSDSQGRTVDFRHTVVVMTSNLASRAILEAARSGQESDPQAASPSLDAA VDEALNSHFRPEFLNRIDEVIRFRPLDQQDLSRIVRLQLADLSRLLREQGLSLEVDAAVIDALVSLGYEPEYGARPLRRV LRRRLENPLATELLEDRFHGAQTVLVHAGASPAEPFRFEPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-89 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001226100.1 | chaperone ClpB | VFG2076 | Protein | 1e-102 | 42 |
