Gene Information

Name : ribD (SynWH7803_1692)
Accession : YP_001225415.1
Strain : Synechococcus sp. WH 7803
Genome accession: NC_009481
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1547794 - 1548912 bp
Length : 1119 bp
Strand : -
Note : -

DNA sequence :
ATGAGGGCGGTCGCTGATCCGGATCAGCGCTGGATTCCCTGGATGCGCCGGGCCTTGGCGCTGGCGGCCTTGGCCGACGG
CCACACCAGCCCCAATCCTCTGGTGGGCGCCGTGGTGCTCGATTCCTCCGGCGTGTTGGTGGGGGAGGGGTTTCATGCTC
GGGCTGGTCAACCCCATGCCGAAGTGGGGGCTTTGGCCCAGGCCGGTGCCGCCGCCCGCGGCGGCACGATCATCGTCACC
CTGGAACCCTGCTGCCATCACGGCCGTACACCGCCCTGCGCCGACGCCGTGATCAAGGCAGGGATCGCTCGCGTGGTGGT
GGCACTCACCGATCCCGACCCTCGCGTTGCCGGCGGCGGTTTGCAACGGCTGCGCGATGCCGGAGTGGAGGTGATCTCCG
GAGTGCTTGAGGCTGAAGCGGCCCACCAGAACCTCGCCTTTGTGTACCGCGTGCGCACCGGTCGGCCCTGGGGAGTGCTC
AAGTGGGCGATGAGCCTCGATGGCCGCACGGCCTTGTCCAATGGCGCCAGTCAGTGGATCAGCGGTCCCAGCGCCCGCAG
CTGGGTGCACCGTTTGCGGGCCCAGTGTGATGCGGTGATTGTGGGGGGCGGCACCGTGCGCGCTGACGACCCTCTGCTCA
CCAGCCGGGGCTTGCGCAGCCCCGAACCGCTGCGGGTGGTGCTGAGCCGCAGCCTGGACTTGCCTGATCAGGCCCAGCTT
TGGGATCAATCCGTTGCTCCCACCCTTGTGGTGCACGGCCTGGACGCGCCGGCGGGCGCAAGGAGCCGCTTGGACGCTGT
CGGTGTGCAGCGGCAGGAGCTGCAGGCCTGCGAGCCCGAGGCGCTGATGGCCGTGTTGGCCCAACGGGGCTGCAATCGGG
TGCTCTGGGAGTGCGGCCCGGGGCTGGCCGCTGCCGCCATCCAGCAGGGTTGTGTGCAGGACATCGCGGCGGTGATTGCA
CCCAAGCTGCTGGGCGGTGAGCCGGCGCGCACCCCTCTGGGGACTCTGGGCTTCCAGGCCATGAACGAGGTTCTGGAGCT
GCAGGGCCTGCAGCAGCAGCGCCTTGCCGACGATCTGTTGCTGCAGGCGACCCTCAGTCCCCTTTCAGATCCGTGCTGA

Protein sequence :
MRAVADPDQRWIPWMRRALALAALADGHTSPNPLVGAVVLDSSGVLVGEGFHARAGQPHAEVGALAQAGAAARGGTIIVT
LEPCCHHGRTPPCADAVIKAGIARVVVALTDPDPRVAGGGLQRLRDAGVEVISGVLEAEAAHQNLAFVYRVRTGRPWGVL
KWAMSLDGRTALSNGASQWISGPSARSWVHRLRAQCDAVIVGGGTVRADDPLLTSRGLRSPEPLRVVLSRSLDLPDQAQL
WDQSVAPTLVVHGLDAPAGARSRLDAVGVQRQELQACEPEALMAVLAQRGCNRVLWECGPGLAAAAIQQGCVQDIAAVIA
PKLLGGEPARTPLGTLGFQAMNEVLELQGLQQQRLADDLLLQATLSPLSDPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-34 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-34 44