Gene Information

Name : phoB (SynWH7803_1545)
Accession : YP_001225268.1
Strain : Synechococcus sp. WH 7803
Genome accession: NC_009481
Putative virulence/resistance : Virulence
Product : two-component system response regulator, phosphate sensing PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1422560 - 1423264 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence :
GTGGGCACGGCGAAGCTGCTGGTGGTGGAAGACGATGATTCGATCAGAGAAACCGTGGAAGAAGCCCTTCGCGCCGAAGG
CTTCGAGGTGAAGTCTTGCGGCAATGGTGCCGACGCCATGGCTTTGCTTTCCGCTCCAAACACTGAGGGAGTTGACCTGC
TGGTGCTCGACCTGATGCTTCCTGGTCTGGGCGGGCTCGATCTCTGCCGACAACTGCGCAAACTCAACAACCACACCCCT
GTGCTGGTGATCAGTGCGCGAGACAGCGAAACCGACAGGGTGCTCGGCCTTGAAGTGGGCGCTGACGACTATCTGGTCAA
GCCCTTTGGCCTGCGAGAACTGGTCGCGCGCTGCCGGGCCTTGCTGCGACGCTCCCAACAGATCGCATCCGTCCCCAGTG
AGGATCGCCAAGTGGTCCAGACGGGCAATCTCTGCCTTTACGCCCAGGAGTGCCGCGTCACCCGCGATGGGGAAGACCTC
ACGCTTTCACCGAAGGAGTACAAAATCCTCGAACTGCTGATCCGCAATCCCAAGAGGGTCTGGAGCAGAGACCAGTTGCT
GGAGCGAATCTGGGGAATCGATTTTGTTGGAGACACCAAAACAGTGGATGTCCACATCCGTTGGTTGAGAGAAAAGATTG
AGGAGGAGCCTTCCTCGCCGCAACACATCCGCACCGTCAGGGGATTCGGCTACCGCTTCGGCTAA

Protein sequence :
MGTAKLLVVEDDDSIRETVEEALRAEGFEVKSCGNGADAMALLSAPNTEGVDLLVLDLMLPGLGGLDLCRQLRKLNNHTP
VLVISARDSETDRVLGLEVGADDYLVKPFGLRELVARCRALLRRSQQIASVPSEDRQVVQTGNLCLYAQECRVTRDGEDL
TLSPKEYKILELLIRNPKRVWSRDQLLERIWGIDFVGDTKTVDVHIRWLREKIEEEPSSPQHIRTVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-22 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_012469.1.7686381. Protein 2e-39 44
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB BAC0083 Protein 3e-29 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_002952.2859905.p0 Protein 2e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_002951.3237708.p0 Protein 1e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_007622.3794472.p0 Protein 2e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_003923.1003749.p0 Protein 1e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_002758.1121668.p0 Protein 1e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_009641.5332272.p0 Protein 1e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_013450.8614421.p0 Protein 1e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_007793.3914279.p0 Protein 1e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_002745.1124361.p0 Protein 1e-36 42
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB NC_009782.5559369.p0 Protein 1e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB VFG1389 Protein 3e-29 43
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB VFG0596 Protein 2e-22 41
phoB YP_001225268.1 two-component system response regulator, phosphate sensing PhoB VFG1563 Protein 1e-30 41