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Name : clpA (SynWH7803_1535) Accession : YP_001225258.1 Strain : Synechococcus sp. WH 7803 Genome accession: NC_009481 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit clpA-like protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1410442 - 1412976 bp Length : 2535 bp Strand : + Note : - DNA sequence : ATGCTGGCCCAGGAAGAGGCCCGCCGCCTCGGCCACAATTTCGTGGGCACTGAGCAGATCCTGCTCGGCTTGATCGGTGA AGGCACCGGCGTTGCCGCCAAGGTTCTCAAATCCATGGGTGTGAACCTCAAGGACGCCAGAGTTGAGGTCGAAAAAATCA TTGGCCGTGGATCTGGGTTCGTTGCCGTCGAAATTCCCTTCACACCACGCGCCAAACGCGTGCTTGAGCTCTCCTTGGAA GAGGCTCGCCAACTCGGTCACAACTACATCGGCACGGAGCATCTGCTGCTCGGTCTGATTCGCGAAGGCGAAGGCGTTGC CGCCAGGGTTTTGGAGAACCTTGGTGTGGATCTCTCCAAGGTGAGAACCCAGGTGATCCGCATGCTCGGAGAAACCGCAG AGGTTGGAGCCGGTGGAAGTGGATCAGGAAGCAAGGGATCCACAAAAACGCCAACGCTCGACGAGTTTGGAAACAACCTC ACCCAACTGGCAGGCGAAGCCAAGCTTGATCCTGTGGTGGGTCGTCAGAGCGAAATCGACCGTGTCATCCAGATCCTTGG CCGCCGCACCAAGAACAATCCGGTCCTGATCGGCGAGCCCGGCGTTGGCAAAACAGCCATCGCCGAAGGATTGGCGCAAC GGATTCAGCAGGGAGACATCCCCGACATCCTTGAGGACAAACGGGTCCTCACCCTCGACATCGGACTTCTTGTCGCCGGC ACGAAGTACAGAGGTGAGTTTGAGGAGCGCCTCAAAAAGATCATGGAGGAAATCAAAGCCGCCGGAAACGTGATCCTGGT GATCGACGAGGTGCACACCTTGATCGGAGCCGGCGCTGCCGAAGGGGCCATCGACGCAGCCAACATTCTCAAGCCAGCCC TGGCACGGGGAGAACTGCAATGCATCGGTGCCACCACCCTCGATGAGTACCGCAAACACATCGAACGTGACGCTGCCCTC GAGCGACGCTTCCAGCCCGTCACGGTGGGAGAACCATCCATTGATGACACCATTGAAATTCTCAAGGGTCTGCGCGAACG CTATGAGCAGCATCACCGCTTGCGCATCACCGATGAAGCGCTTGAAGCCGCTGCAACCCTTGGCGATCGCTACATCTCCG ACCGTTTCCTTCCCGACAAGGCCATCGATCTGATCGATGAAGCCGGCAGCCGCGTGCGCCTGATGAATTCCAAGCTTCCA CCGGAAGCCAAGGAAGTGGATAAGGAACTTCGTGCTGTTCAGAAGGAGAAAGAGGACGCCGTCCGCGAGCAGGATTTCAG CCGCGCCGGTGAATTGCGCGACAAAGAAGTTGAGCTGCGGGACAAGATTCGTTCGCTGTTGCAGTCCAGCCGCGAGGACT CCCCCTCTGACAATCAACAATCTGAGGATCAAGCCACAGACGTTGACGTTGCTTCAACCGAGTCTGAGGGAGCCACTGAG TTGGCGGTCACGGGCACGACACCTGTTGTGAACGAAGAAGACATCGCTCAGATCGTGGCGTCCTGGACGGGTGTGCCTGT TCAGAAACTCACGGAAAGCGAGTCGGTGAAACTCCTCAACATGGAGGAAACCCTGCACAAGCGCTTGATCGGTCAGGACG AAGCGGTCAAAGCGGTCTCCAAAGCCATCCGCCGGGCGCGTGTGGGGCTGAAAAATCCCAACCGCCCCATCGCCAGCTTC ATTTTCTCTGGCCCGACGGGTGTGGGCAAAACCGAACTCACCAAAGCGCTCGCGGCTTACTTCTTCGGCAGTGAAGAAGC CATGATCCGCCTCGACATGTCGGAATTCATGGAGCGGCATACGGTCAGCAAATTGATCGGATCCCCTCCGGGCTACGTGG GATTCAACGAAGGCGGTCAGCTCACGGAAGCCGTGCGTCGCAGGCCTTACACAGTGGTGCTGTTCGATGAGATTGAGAAA GCCCACCCCGATGTCTTCAATCTGCTGCTGCAGCTGCTCGAAGATGGCCGTCTCACCGATTCCAAAGGCCGGACGGTGGA TTTCAAAAACACCTTGATCATCATGACCTCGAACATCGGTTCGAAAGTGATCGAAAAAGGTGGTGGTGGCCTCGGCTTCG AATTCTCCGGCGAGAACGCTGAAGAAAATCAGTACAACCGAATCCGTTCCCTGGTGAATGAAGAGCTCAAGCAGTACTTC CGCCCTGAGTTCCTGAACCGACTGGACGAAATCATCGTGTTCAGACAGCTCAACCGTGACGAAGTGAAGGAGATCGCAGA AATCATGCTGCGTGAAGTCTTTGGTCGGATCGGTGAAAAGGGAATCACCCTTACGGTCTCCGATGCCTTCAAAGAGCGGC TTGTGGAAGAGGGTTACAACCCCGCCTACGGCGCCAGACCACTGCGCCGTGCCGTCATGCGTCTGCTCGAGGACAGCCTT GCTGAGGAAGTTCTCTCCGGTCGCATCAAGGACGGGGACGAAGCTGAAGTGGACGTCGAAGATGGCAAGGTGGTTGTCAA ACACCTGAACCGCACGGCCACTGAGACCCCTGAGCTGGCCAGTGCCGGTCGCTGA Protein sequence : MLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLE EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVGAGGSGSGSKGSTKTPTLDEFGNNL TQLAGEAKLDPVVGRQSEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEDKRVLTLDIGLLVAG TKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAAL ERRFQPVTVGEPSIDDTIEILKGLRERYEQHHRLRITDEALEAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLP PEAKEVDKELRAVQKEKEDAVREQDFSRAGELRDKEVELRDKIRSLLQSSREDSPSDNQQSEDQATDVDVASTESEGATE LAVTGTTPVVNEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHKRLIGQDEAVKAVSKAIRRARVGLKNPNRPIASF IFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEK AHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSLVNEELKQYF RPEFLNRLDEIIVFRQLNRDEVKEIAEIMLREVFGRIGEKGITLTVSDAFKERLVEEGYNPAYGARPLRRAVMRLLEDSL AEEVLSGRIKDGDEAEVDVEDGKVVVKHLNRTATETPELASAGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_001225258.1 | ATP-dependent Clp protease ATP-binding subunit clpA-like protein | VFG0079 | Protein | 0.0 | 58 |
| clpA | YP_001225258.1 | ATP-dependent Clp protease ATP-binding subunit clpA-like protein | VFG0080 | Protein | 1e-147 | 52 |
| clpA | YP_001225258.1 | ATP-dependent Clp protease ATP-binding subunit clpA-like protein | VFG2076 | Protein | 2e-100 | 41 |
