Gene Information

Name : pykF (SynWH7803_1218)
Accession : YP_001224941.1
Strain : Synechococcus sp. WH 7803
Genome accession: NC_009481
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1109324 - 1111108 bp
Length : 1785 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGGCGGTGCTCGATCTGAACCGTAGAACCAAGATCGTTGCAACGATCGGCCCAGCCACCGAGAGTCCTGAGCGAATCCG
TGAGCTGATTCAGGCCGGTGCCACCACCTTCCGTTTGAATTTTTCCCACGGGGATCACAGCGAGCATGCCGCTCGGATGG
CGACAATCCGCCAGGTGGCGCATGAGCTGGGCGTTCATATCGGCATCCTCCAGGACCTTCAGGGACCCAAGATCAGGCTC
GGCCGTTTTGAGGAAGGTCCGATCACCGTTGGCAAAGGTGATCACTTCTCGCTCACCTCAAAACAGGTGCGCTGCAACCA
AACGGTTGCCACGGTCACCTACGACAAGCTTGCTGATGAGGTCACCGCAGGCAGTCGCATACTTCTCGACGATGGCCGCG
TCGAAATGCGTGTGGACAGGGTCGATCTGGCGGATCAGACCCTTCATTGCGTCGTCACCGTTGGCGGTGTTCTCTCCAAT
AACAAAGGGGTGAATTTCCCTGATGTGCAACTTTCTGTGCGTGCACTAACCCAGAAAGACCGCCAGGATCTCGCCTTCGG
ACTTCAGCAGGGTGTCGACTGGGTCGCCCTCAGTTTCGTGCGCAATCCCTCGGACATGCAGGAGATCCGGGAACTCATTC
GCAAACATGGCTTCACCACTCCTGTGGTGGCGAAGATCGAGAAATTTGAAGCGATCGACCAGATCGACGCGATCTTGCCG
CTCTGCGACGGGGTCATGGTGGCCCGCGGAGATCTCGGCGTTGAAATGCCTGCTGAAGAAGTTCCCCTGCTGCAGAAGGA
TCTCATTCACAAAGCCAACAGCCTGGGCATCCCGATCATCACGGCAACCCAGATGCTCGACTCAATGGCTTCAAGCCCCA
GACCCACCCGAGCAGAGGTGAGTGACGTGGCCAACGCAATCCTGGATGGAACCGACGCGGTCATGCTTTCCAATGAAACC
GCCGTTGGAGATTTCCCCGTTGAAGCGGTCGAAACCATGGCCACGATTGCGCGGCGGATTGAACGGGACTACCCCCAGCG
TCCCATTGACACCCACCTGCCCAGCACCATCCCCAACGCCATCAGTGGAGCGGTGAGCAGTATTGCTCGACAACTCAACG
CAGCAGCCATTCTTCCCCTCACCAAGAGTGGTGCCACAGCCCACAACGTGAGCAAGTTCAGGCCCTCCACGCCGATTCTG
GCGATCACTTCAGAAGTTTCGGTGGCACGCAAACTGCAGCTGGTGTGGGGAGTCACCCCCTTGCTGATTGAAACGCAGAA
GAGCACAACAGCCACCTTCACCCTTGCGATGGGAGTCGCCCAGGAGATGGGCGTTCTCAAAGATGGTGATCTCTGCGTTC
AGACGGCAGGAACCCTCGCAGGGGTGAGCGGCTCCACCGATCTGATCAAAGTGGGCATTGTGAGCGCTGTGCTGGGACGG
GGAACTGGAATCGGCAACGGTTCGATCAGTGGAAAGGTGCGCATCGCCCTCAACGCCAGTGACTGTGCTCGTCTGGAACC
CGGCGAAATCCTTGTAGCCAGCGACACCAACGCTGACTACCTTGACGCCTTCCGTGAAGCTGCAGCAATCATCACCGAAT
GCGGTGGCGATGATTCGCATGCAGCAGTCATTGCCCGCCGGCTCGGTTTGTCAGTGATCACCGGTGTCGCCAATGCCACC
AGGGATTTACGGGAAGGTGAGGTGGTCACCCTCCACATCAAGGAAGGCGCAGTTCACCGTGGCACCGGCAGCAACACGCT
GATGAAACTCGACACGATGCTCTAA

Protein sequence :
MAVLDLNRRTKIVATIGPATESPERIRELIQAGATTFRLNFSHGDHSEHAARMATIRQVAHELGVHIGILQDLQGPKIRL
GRFEEGPITVGKGDHFSLTSKQVRCNQTVATVTYDKLADEVTAGSRILLDDGRVEMRVDRVDLADQTLHCVVTVGGVLSN
NKGVNFPDVQLSVRALTQKDRQDLAFGLQQGVDWVALSFVRNPSDMQEIRELIRKHGFTTPVVAKIEKFEAIDQIDAILP
LCDGVMVARGDLGVEMPAEEVPLLQKDLIHKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILDGTDAVMLSNET
AVGDFPVEAVETMATIARRIERDYPQRPIDTHLPSTIPNAISGAVSSIARQLNAAAILPLTKSGATAHNVSKFRPSTPIL
AITSEVSVARKLQLVWGVTPLLIETQKSTTATFTLAMGVAQEMGVLKDGDLCVQTAGTLAGVSGSTDLIKVGIVSAVLGR
GTGIGNGSISGKVRIALNASDCARLEPGEILVASDTNADYLDAFREAAAIITECGGDDSHAAVIARRLGLSVITGVANAT
RDLREGEVVTLHIKEGAVHRGTGSNTLMKLDTML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-78 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-78 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-78 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-78 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_001224941.1 pyruvate kinase VFG0479 Protein 1e-78 44