Gene Information

Name : SynWH7803_0979 (SynWH7803_0979)
Accession : YP_001224702.1
Strain : Synechococcus sp. WH 7803
Genome accession: NC_009481
Putative virulence/resistance : Virulence
Product : ABC-type Mn2+ transport system, ATPase component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 903875 - 904624 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
ATGACGATGCGCATCGCTGCTGAGCAGCTCTGTGTGGATTACAACGGCACGGTGGCGCTGTACGACGCCTCGCTGAAGCT
TCCCTCTGGATGCATCTGCGGACTTGTTGGCATGAATGGTGCCGGTAAGTCCACGCTGTTCAAGGCCCTCACCGGGTTCA
TTCGTCCATCGCGGGGACGGATCCGGATCAACGGCTGCAGCATCGTTGAGGCTCAGCGCCAGCAGTCCGTGGCCTACGTG
CCCCAGAGCGAAGAGGTCGACTGCCAATTCCCAGTATCGGTTTGGGATGTGGTGATGATGGGCCGCTATGGATCGATGAA
CGCCCTGCGCATCCCCCGCAGTTCCGATCGGGTGGCCGTTCGCGATGCTCTCGAACGGGTGGATCTTCTGGAGCTGAGTC
GACGACCGATCGGCACGCTCTCCGGTGGCCAGCGCAAACGTGCCTTCATCGCCCGTGCCATCGCGCAGCGTGCTGATGTG
CTGCTTCTCGACGAACCGTTCAACGGCGTGGATGTGCGCACCGAGAAATTGATGGCCGACCTCTTTCTGCAGTTCCGCCG
AGAGGGATGCACGATTCTGATCTCCACCCACGATCTCACCCACGTGCGTGATTTCTGTGATCTCGTGGTGCTCATCAACA
AAACCGTGTTGGCCTATGGCGAAACATCGGAAGTGTTCACACCCGAAAATCTGTCCCTGACTTTCGGCGGCGTGCCCCCA
GATCTGCTCACAGGGAACAGCTCTCCCTGA

Protein sequence : 
MTMRIAAEQLCVDYNGTVALYDASLKLPSGCICGLVGMNGAGKSTLFKALTGFIRPSRGRIRINGCSIVEAQRQQSVAYV
PQSEEVDCQFPVSVWDVVMMGRYGSMNALRIPRSSDRVAVRDALERVDLLELSRRPIGTLSGGQRKRAFIARAIAQRADV
LLLDEPFNGVDVRTEKLMADLFLQFRREGCTILISTHDLTHVRDFCDLVVLINKTVLAYGETSEVFTPENLSLTFGGVPP
DLLTGNSSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-47 56
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-47 56
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-45 55
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-46 55
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-46 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SynWH7803_0979 YP_001224702.1 ABC-type Mn2+ transport system, ATPase component BAC0350 Protein 3e-46 55
SynWH7803_0979 YP_001224702.1 ABC-type Mn2+ transport system, ATPase component BAC0440 Protein 1e-52 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SynWH7803_0979 YP_001224702.1 ABC-type Mn2+ transport system, ATPase component VFG0526 Protein 2e-46 55