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Name : gabD (CMM_0933) Accession : YP_001221674.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : putative succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1075427 - 1076902 bp Length : 1476 bp Strand : + Note : putative succinate-semialdehyde dehydrogenase [NADP+] (ZP_00293214.1| COG1012: NAD-dependent aldehyde dehydrogenases [Thermobifida fusca]; YP_054797.1| aldehyde dehydrogenase [Propionibacterium acnes KPA171202]). pfam00171, Aldedh, Aldehyde dehydrogenase DNA sequence : ATGACCGCATCCACCGAGACCGACCTCCTGTCGGGCACGCCCACCACCCTGCTCATCGGGGGCGAGCGGGTCGAGGCCGA GGGCGGCGCGACGTTCGAGGTCCGGGATCCCGCGACCGACGCCGTCCTCGCGCGGGTGGCCGACGCGAGCCCCGCGGACG GCGCGCGTGCCCTCGACGCGGCGGTGGACGCGCAGGCGGCGTGGGCGGCGACCGCGCCGCGCGCCCGGGGCGAGATCCTC CGCCGCGCGTTCGACCTCCTCCAGGAGCGCAAGGACGAGTTCGCGCTCCTCATGACGCTCGAGATGGGCAAGCCGCTGGC CGAGTCTCTCGGCGAGGTGACCTACGGCGGCGAGTTCCTCCGTTGGTTCTCCGAGGAGGCCGTGCGCATCACGGGCCGCT ACGGCACCAACCCCGAGGGCACCGGCCGCATGATCGTGTCGCAGCACCCGGTCGGACCCGTGCTGCTCATCACGCCCTGG AACTTCCCGCTCGCGATGGCGACCCGCAAGATCGCGCCGGCGCTCGCGGCGGGCTGCACCGTCGTGATCAAGCCGGCCGA CCTCACGCCGCTCACCACGCTCCGATTCGCCGAGCTGCTGGCGGAGGCGGGGCTGCCCGCGGGCGTCCTCAACGTGATCC CCACCACCCGGGCCGCCGACGTCACCGGCCCGCTCATCTCCGACCCGCGGCTGCGCAAGCTGAGCTTCACCGGATCCACG CCCGTCGGACGCCAGCTCGGCGCGCAGGCGGCGCAGAACGTGCTGCGCGTCTCGCTCGAGCTAGGCGGCAACGCGCCGTT CGTGGTCTTCGCCGACGCCGACATCGACAAGGCCGTGGAGGGCGCCATGGCGGCGAAGTTCCGCAACGTCGGGCAGGCGT GCACGGCGGCGAACCGCTTCATCGTCGAGGCGTCGATCGCGGACGCGTTCGCCGACCGGCTGCAGGAGCGCATCGACGCC ATGCGGATCGGCCGCGGCACCGAGGAGGGCGTCACGGTCGGCCCGCTCATCGACGGCCGCGCGGTCGACAAGGCCGACCG CCTGGTGCGCGACGCCGTGGAGCGCGGCGCGACCGTGCGCGCGGGCGGCGAGCCGCGGGACGGCGCCGGCCACTTCTACC CGCCGACCCTCATCACGGGCGTCGCCGAGGGCAGCGACATCCTGCGCGAGGAGATCTTCGGGCCGGTGGTCGCGATCGTG CCCTTCGACGACGAGGACGACGCGGTGCGCCTCGCCAACGACACCGAGTTCGGCCTCGTGTCCTACGTCTTCACGCGCGA CCTCGCGCGCGGCCAGCGCATGATCGAGCGGCTCGAGACGGGCATGACGGGCCTCAACATGGGCGTCATCTCCAATGCGG CCGCGCCGTTCGGCGGCGTGAAGCAGTCGGGGCTCGGCCGCGAGGGCGGGCTCGAGGGGATCCACGAGTACCTGAACACG AAGTACACGCTCACGTCCGACCCCTTCGCGTCGTAG Protein sequence : MTASTETDLLSGTPTTLLIGGERVEAEGGATFEVRDPATDAVLARVADASPADGARALDAAVDAQAAWAATAPRARGEIL RRAFDLLQERKDEFALLMTLEMGKPLAESLGEVTYGGEFLRWFSEEAVRITGRYGTNPEGTGRMIVSQHPVGPVLLITPW NFPLAMATRKIAPALAAGCTVVIKPADLTPLTTLRFAELLAEAGLPAGVLNVIPTTRAADVTGPLISDPRLRKLSFTGST PVGRQLGAQAAQNVLRVSLELGGNAPFVVFADADIDKAVEGAMAAKFRNVGQACTAANRFIVEASIADAFADRLQERIDA MRIGRGTEEGVTVGPLIDGRAVDKADRLVRDAVERGATVRAGGEPRDGAGHFYPPTLITGVAEGSDILREEIFGPVVAIV PFDDEDDAVRLANDTEFGLVSYVFTRDLARGQRMIERLETGMTGLNMGVISNAAAPFGGVKQSGLGREGGLEGIHEYLNT KYTLTSDPFAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-98 | 49 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 8e-96 | 48 |
