Gene Information

Name : CMM_0875 (CMM_0875)
Accession : YP_001221615.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 997737 - 998759 bp
Length : 1023 bp
Strand : +
Note : putative transcriptional regulator, LacI-family (NP_630441.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]; ZP_00198171.1| hypothetical protein Krad024574 [Kineococcus radiotolerans SRS30216]). pfam00356, LacI, Bacterial regulatory p

DNA sequence : 
ATGATGACGACGGAGACGCCGCGCGGCAGGGCGCCCAGCATCCGCGACGTCGCGCGCCTCGCCGGGGTATCGCACCAGAC
GGTCTCGCGCGTGCTCAACGACTCGCCCTCGCTCCGCGCCGAGACCCGCCAGCGCGTGCTCGACGTGATGGAGCAGGTGC
AGTACCGGCCGAACCGCGCCGCCCGCGCCCTCGTGACGAGCCGCTCGCGCACGATCGGCGTGCTCACCGCCCAGAGCTCC
CAGTACGGTCCGGCGTCGTCCATCGCGGCGATCGAAGCGGCGGCCCGCGAGGCCGGGTACCTGGTCACGACCACCAACCT
GGCGGCGGACGACGAGGCCGCGATCCAGGTCGCGCTCGGCCACCTCGTCGACCAGGCGGTCGAGGGCCTCGTGGTCGTGG
CGCCGCAGGTGCGCGTGCGCGAGGTCATCGCGAGCATGTCCCTCGACGTCCCCTACGTGACCATGCAGAGCGACGGGCGC
GGCGACGCCCACGACCTCTCCGTCGACCAGATCGCGGGCGCGCGCCTCGCCACGAGGCACCTGCTCGAGCTCGGCCACCG
CGACATCTACCACCTCGCGGGGCCGCAGGACTGGATCGAGGCGGAGGCGCGGATGCGCGGCTTCCTCGACGCGATGTCGG
CCGCCGACGTGCCCACGACCGCGCCCATCCTCGGCGACTGGACCGCGGAGTTCGGGTTCTACGCGGGCCGCGAGATGCTG
CGCCTCCGCGACTTCACGGCGATCTTCTCCAGCAACGACCAGATGGCCCTCGGGCTCATCCACGCCGTGCGCGATGCGGG
CCTCGACGTGCCGGGCGACGTCAGCATCGTCGGCTTCGACGACATCCCGGAGGCCGCGCACTTCTGGCCGCCGCTCACGA
CCGTCCGCCAGGACTTCGCCGAGGTCGGGCGCCGCTGCGTCGCGCTGCTGCTCGACGGCATGGGCGGCACGGGGGACAGG
TACCGCGGCACGATCACGCCGGAGCTGGTCGTCCGCGCGTCCACCGGCCCGCCCTCGTCCTGA

Protein sequence : 
MMTTETPRGRAPSIRDVARLAGVSHQTVSRVLNDSPSLRAETRQRVLDVMEQVQYRPNRAARALVTSRSRTIGVLTAQSS
QYGPASSIAAIEAAAREAGYLVTTTNLAADDEAAIQVALGHLVDQAVEGLVVVAPQVRVREVIASMSLDVPYVTMQSDGR
GDAHDLSVDQIAGARLATRHLLELGHRDIYHLAGPQDWIEAEARMRGFLDAMSAADVPTTAPILGDWTAEFGFYAGREML
RLRDFTAIFSSNDQMALGLIHAVRDAGLDVPGDVSIVGFDDIPEAAHFWPPLTTVRQDFAEVGRRCVALLLDGMGGTGDR
YRGTITPELVVRASTGPPSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0036 YP_001220775.1 LacI family transcriptional regulator Not tested chp/tomA region Protein 1e-42 43