|
Name : metB (CMM_0873) Accession : YP_001221613.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 2.5.1.48 Position : 995583 - 996755 bp Length : 1173 bp Strand : + Note : catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine DNA sequence : GTGAGCGACAAGCACGACTTCGACACCCGCGCGATCCACGCCGGACAGGACCCGGATCCCACCACGGGCGCGGTCATCCC GCCGCTCTACCTCACGAGCACCTTCGTGCAGGACGGGATCGGCGGGCTCCGCGAGGGCTACGAGTACGCGCGGAGCGCCA ACCCCACGCGCACCGGCCTGCAGGAGCTGCTCGCGTCGCTCGAGAAGGGGAAGCACGCGTTCTCGTTCGCCTCGGGGCTC GCCGCCGAGGACACGCTGCTGCGCGCGATCACCCGCCCCGGCGACCGCATCGTGCTGAGCGACGACGTGTACGGCGGCAC CTACCGCCTCCTCACGCGCGTGCTCGGCGACTGGGGGATCGTCGTCGAGACCGTCGACATGAGCGACCTCGCCGCGGTCG AGCGGGTGCTCGGTTCCGGGCCGGCGAAGGTCCTCTGGGTCGAGACGCCCAGCAACCCGCTCATGAAGATCAGCGACATC CGCGCGCTCGCCGACCTCGGCCACGCAGCGGGCGCCACGGTCGTCGTCGACAACACGTTCGCGTCGCCGTACCTCCAGCA GCCGCTGACGCTCGGCGCCGACGTGGTCGTGCACTCGACCACCAAGTACCTGGGCGGCCACTCCGACGTGCTCGGCGGCG CCGTGGTCCTCGACGACGACGCGCTCGCCGAGAAGGTCGGCTTCCTGCAGTTCGCGGTCGGCGCCGTCTCCGGCCCCATG GACGCCTGGCTCACGACCCGCGGGATCAAGACACTCGCCGTCCGCGTCGAGCGCCACTCCGCGAACGCCGAGGAGATCGC CGCCTTCCTGCAGCAGCACCCCGACGTCACGGCCGTGCACTACCCGGGCCTGCCGGAGCACCCGGGCCACGACATCGCCA AGGCCCAGATGACGGGCTTCGGCGGCATGATCTCGTTCCAGGTGCGCGGGGGAGCGAAGGCCGCGCGCCGCGTGGTCGAG GGCACGCGCGTGTTCCAGCTCGCGGAGTCGCTCGGCGGCGTCGAGTCGCTCATCAGCTACCCGTCCGAGATGACGCACGC GTCCGTCAAGGGCACGCCGCTCGAGGTCCCTGGCGACCTGGTGCGCCTGTCGGTCGGCATCGAGTCCGTCGAGGACCTCG TCGTCGACCTCGAGCGCGCGCTCGGCAAGGCCCTCAAGCAGGGCAAGCACTAG Protein sequence : MSDKHDFDTRAIHAGQDPDPTTGAVIPPLYLTSTFVQDGIGGLREGYEYARSANPTRTGLQELLASLEKGKHAFSFASGL AAEDTLLRAITRPGDRIVLSDDVYGGTYRLLTRVLGDWGIVVETVDMSDLAAVERVLGSGPAKVLWVETPSNPLMKISDI RALADLGHAAGATVVVDNTFASPYLQQPLTLGADVVVHSTTKYLGGHSDVLGGAVVLDDDALAEKVGFLQFAVGAVSGPM DAWLTTRGIKTLAVRVERHSANAEEIAAFLQQHPDVTAVHYPGLPEHPGHDIAKAQMTGFGGMISFQVRGGAKAARRVVE GTRVFQLAESLGGVESLISYPSEMTHASVKGTPLEVPGDLVRLSVGIESVEDLVVDLERALGKALKQGKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-78 | 47 |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 3e-77 | 47 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 6e-56 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| metB | YP_001221613.1 | cystathionine gamma-synthase | BAC0207 | Protein | 8e-67 | 43 |
