Gene Information

Name : CMM_0684 (CMM_0684)
Accession : YP_001221424.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 776547 - 777245 bp
Length : 699 bp
Strand : +
Note : putative antimicrobial peptide ABC transporter, ATP-binding protein (NP_815381.1| ABC transporter, ATP-binding protein [Enterococcus faecalis V583]; ZP_00283781.1| COG1136: ABC-type antimicrobial peptide transport system,ATPase component [Burkholderia fun

DNA sequence : 
ATGAATGACGAGCTCCTGTCCGCCCACGGGGTGGGCAAGACGTACAGCACGCGCAGCACGACCTCCACGGCGCTCGACGA
CGTCTCCCTGGAGGTGCGCGCCGGCGACCGGCTCGCGATCACCGGCCGCAGCGGGAGCGGCAAGTCCACGCTCATGCACG
TGCTGAGCCTGCTCCACTCGCCCACGTCCGGGGACGTGCGGGTCGCGGGGCAGCCCGCGAGCGGCATGTCGGAGCGGCAG
AAGGACCGCGTGCGGAACGAGCGCTTCGGGTTCGTGTTCCAGAACTTCCAGCTCGACCACCGCCAGTCCGTCGCCGACAA
CGTGAGCCTGCCGCTCCGGATCGCCGGGAAGAGTCGAGCCGCCGCCCGACGCCGATCCCTGGATCTCCTGGATCGCTTCG
GGCTGGCGGCGCTCGCGGCGCGTCGTGCCGGCGACCTGTCCGGCGGACAGAAGCAGCGCGTCGCGATCGCACGTGCTCTC
GCCAACGAGCCGCAGATCCTGTTCGCGGACGAGCCGACCGGCAGCCTCGACTCGCAGAACGCGGAGGTGGTGGCGGAGAC
CCTGCTCGCCTACCCCGACGAGGGCGACACCGCCCTGGTCCTCGTGACCCATGACGACGCGCTCGCGCGACGCTGCTCAC
GGGTGATCCGCGTCCAGGACGGTCGGCTCGCCGACCTCGCCGAGGCGGTGGCGCGATGA

Protein sequence : 
MNDELLSAHGVGKTYSTRSTTSTALDDVSLEVRAGDRLAITGRSGSGKSTLMHVLSLLHSPTSGDVRVAGQPASGMSERQ
KDRVRNERFGFVFQNFQLDHRQSVADNVSLPLRIAGKSRAAARRRSLDLLDRFGLAALAARRAGDLSGGQKQRVAIARAL
ANEPQILFADEPTGSLDSQNAEVVAETLLAYPDEGDTALVLVTHDDALARRCSRVIRVQDGRLADLAEAVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-25 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMM_0684 YP_001221424.1 peptide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-25 44
CMM_0684 YP_001221424.1 peptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-28 42