Gene Information

Name : CMM_0365 (CMM_0365)
Accession : YP_001221105.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Virulence
Product : putative Fe3+-siderophore ABC transporterATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 444941 - 445711 bp
Length : 771 bp
Strand : +
Note : putative Fe3+-siderophore ABC transporter, ATPase component (ZP_00226722.1| COG1120: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Kineococcus radiotolerans SRS30216]; CAB92552.1| FecE protein [Serratia sp. ATCC 39006]). pfam0

DNA sequence : 
ATGACGCTCGAGGCGCGGGGCGTCAGCTGGTCGCGGGGCGGGCGGATCGTGGTGGACGACGTCACGCTGGAGCCGGCGCC
CGGATCCACCGTGGGGCTGCTCGGGCCGAACGGGTCCGGCAAGTCGTCGCTCCTCAAGCTGCTCCAGGGGGCTGCGTCTC
CGGACTCCGGCCGCGTGACGCTCGACGGCGCCGACCTCGCGGGGCTCCGCCGCCGCGACGTCGCCCGCCGGGTCGCGACC
GTGACGCAGCACGGCGAGACCGAGGTCGACATCGCGGTGCGCGACGTCGTGCGCCTCGGCCGCACGCCGTACCGCACGCT
GCTCGGCGGGGACACGGCGGAGGATGCGGCGGCCATCGACCGGGCCATCGCGCACGTGGGCCTCGAGGCGAAGGCCGACC
GCGCGTGGCGCACGCTCTCCGGCGGCGAGCGGCAGCGGGCGCACATCGCGCGCGCCCTCGCGCAGGAGCCGCGCGAGCTG
CTGCTCGACGAGCCGACGAACCACCTCGACATCCGCCACCAGCTGGAGCTGCTCGCCCTCGTGCGCGACCTGCCGGTGAC
CACGGTGGTCGCGCTGCACGACCTCAACCTCGCGGCGATGTTCTGCGACAGCGTGCTCGTGCTGCGCGAGGGGCGCGTGG
TGGCGGGCGGTCATCCGCGCGAGGTGCTGACGCCCGAGCTCATCGCCGACGTCTACGGGGTGCGGGCGGTCGTGACGCAC
GATGCGGCGGTCGGCTGCTCGCGCGTCCTGTTCGACGCGGCTCCCCTCTAG

Protein sequence : 
MTLEARGVSWSRGGRIVVDDVTLEPAPGSTVGLLGPNGSGKSSLLKLLQGAASPDSGRVTLDGADLAGLRRRDVARRVAT
VTQHGETEVDIAVRDVVRLGRTPYRTLLGGDTAEDAAAIDRAIAHVGLEAKADRAWRTLSGGERQRAHIARALAQEPREL
LLDEPTNHLDIRHQLELLALVRDLPVTTVVALHDLNLAAMFCDSVLVLREGRVVAGGHPREVLTPELIADVYGVRAVVTH
DAAVGCSRVLFDAAPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-32 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMM_0365 YP_001221105.1 putative Fe3+-siderophore ABC transporterATPase VFG0925 Protein 4e-21 42