Gene Information

Name : CMM_0362 (CMM_0362)
Accession : YP_001221102.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : putative alpha glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1501
EC number : -
Position : 440654 - 442702 bp
Length : 2049 bp
Strand : +
Note : putative alpha glucosidase (NP_459046.1| putative glycosyl hydrolase [Salmonella typhimurium LT2]; XP_388973.1| hypothetical protein FG08797.1 [Gibberella zeae PH-1])., pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31., InterPro: Glycoside hydrola

DNA sequence :
ATGATCGACGACGACCAGCACTTCACGAGCGACGGGACGCGCCTCGTCTGGCGCGGCGACGGGGAGACCCTCGTCGTGGA
GCCGTGGGGCCCCGACAGCCTCCGCGTGCGCTCCCGCATCATGGCGCCCGTGGCGGACGCCGACTGGGCGCTGCTGCCGC
AGCCCGAGGAGCGCCCGCGCATCGAGGTCGACGGCGCGACGGCCCGGATCACGAACGGCGGCATCACGGCCGTGCTCGTC
TCCGAGTCCTCCTACGGCTACCAGACCGGCTACGAGGAGAACCGCTGCCACGTGACGTACCTCGACCGGCACGGCGAGGT
GCTGCTCGAGGAGATCGGCACGGGCGGCGCCCTGCACCTGCGGGCGCGCGAGCAGCGGCCGCACCTCGGCGGCGACTTCC
GCATCACGGCGTCGTTCGCGACCGGGCCCGACGAGCGGCTGTACGGCATGGGGCTGTACCAGCAGGACATCCTCGACCTC
GCCGGATCCACGTTCGAGCTCGCGCACCGCAACTCGCAGGCGAGCGTGCCGTTCGTGATGTCGAGCCGCGGCTACGGCTT
CCTCTGGCACGACCCGGCGATCGGCCGCGCGACCTTCGCCGCGAACCGCGTCGAATGGACGGCGGAGACGAGCGAGCAGC
TCGACTACTGGATCACCGCGGGCGACACCCCGGCTGACATCAGCCGCGCGTACGCGCGGGCCACCGGATCCGCGCCCATG
ATGCCCGAGCACGGCCTCGGCTTCTGGCAGTGCAAGCTGCGCTACTGGAACCAGGAGCAGCTGCTCGAGGTGGCGCGCGA
GCACACCAGGCGCGGGCTGCCGATGGACGTCATCGTCGCCGACTTCTTCCACTGGCCGAAGATGGGCGACCTCCGCTTCG
AGGAGGAGTTCTGGCCGGATCCGACCGCGATGGTCGAGGAGCTGCGCAGCATGGGCATCGAGCTCATGGTCTCCATCTGG
CCGCAGGTGTCGCTCGAGTCGGAGAACTACGCGCGCATGAAGAAGGAGAACCTCCTGGTGCGCAGCGAGCGCGGGATCGA
CGTGCAGATGCAGTTCGAGGGGCCGAGCGCCTTCGTCGACGTCACGAACCCGGACGCGCGCCGCCACCTCTGGGAGACGG
CGCAGCGGGGCTACGGCGCGCACGGGATCCGGCTGTTCTGGCTCGACGAGGCGGAGCCCGAGTACGGCGTCTACGACTAC
GACAACTACCGGTACCACGCGGGACCCAACGTGCGGGTCGGCAACGTGTACCCGCAGATGTTCTCGCGCGCGATGCACGA
GGGGCGGATCCAGGCGGGGCAGGAGCCGGGCGTCGACCTGGTGCGCGCGGCGTGGGCCGGCAGCCAGCGCTACGGCGCGC
TCGTCTGGTCGGGCGACATCCACTCCACGTTCGAGGCGCTCGCGCGGCAGGTGACCGCGGGGATCCACATGGGCGTCGCC
GGCATCCCCTGGTTCACGACCGACATCGGCGGCTTCGCGGGCGCCCGCACCGACGACCCGGCGTTCCACGAGCTGCTCGT
GCGCTGGTTCCAGTTCGGCGCCTTCTCGCCCGTGATGCGGCTGCACGGCGACCGGGGTCCGAGCGTCGAGGTGCGCGCGG
CGGACGGGTCGCGCCGGGCTCCGAGCGGATCCGGCAACGAGCTCTGGAGCTTCGGCGAGGAGGTCTACGGGATCCTCGCC
GGCTACGTGCACCTGCGCGAGCGGCTGCGGCCCTACCTCCGCGACGTGATGCGCGAGGCCCACGAGGACGGCCAGCCGGT
GATGCGCGGCATGTTCCACGTCTTCCCCGACGACGCCGCGAGCTGGACCCTCGGCGACCAGTACATGCTCGGCGCCGACG
TGCTCGTGGCGCCCGTGCTCGAGGCCGGCGCGCGCTCGCGGAGCGTGCACCTGCCCGCGGGGACGTCGTGGATCGAGGCG
TCGACCGGTGCCCGGCACGAGGGCGGTCAGCGGGTGGTCGCGGATGCGCCGCTGCACGTGATCCCGATCTTCGTGCGCGC
GGGCGCGGCCGTGGAGGTGCGGCTGCCGGAGGGCGATCCCGTGGCGTGA

Protein sequence :
MIDDDQHFTSDGTRLVWRGDGETLVVEPWGPDSLRVRSRIMAPVADADWALLPQPEERPRIEVDGATARITNGGITAVLV
SESSYGYQTGYEENRCHVTYLDRHGEVLLEEIGTGGALHLRAREQRPHLGGDFRITASFATGPDERLYGMGLYQQDILDL
AGSTFELAHRNSQASVPFVMSSRGYGFLWHDPAIGRATFAANRVEWTAETSEQLDYWITAGDTPADISRAYARATGSAPM
MPEHGLGFWQCKLRYWNQEQLLEVAREHTRRGLPMDVIVADFFHWPKMGDLRFEEEFWPDPTAMVEELRSMGIELMVSIW
PQVSLESENYARMKKENLLVRSERGIDVQMQFEGPSAFVDVTNPDARRHLWETAQRGYGAHGIRLFWLDEAEPEYGVYDY
DNYRYHAGPNVRVGNVYPQMFSRAMHEGRIQAGQEPGVDLVRAAWAGSQRYGALVWSGDIHSTFEALARQVTAGIHMGVA
GIPWFTTDIGGFAGARTDDPAFHELLVRWFQFGAFSPVMRLHGDRGPSVEVRAADGSRRAPSGSGNELWSFGEEVYGILA
GYVHLRERLRPYLRDVMREAHEDGQPVMRGMFHVFPDDAASWTLGDQYMLGADVLVAPVLEAGARSRSVHLPAGTSWIEA
STGARHEGGQRVVADAPLHVIPIFVRAGAAVEVRLPEGDPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0551 NP_814321.1 glycosyl hydrolase Not tested Not named Protein 1e-142 41
ef0077 AAM75281.1 EF0077 Not tested Not named Protein 1e-142 41